RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 LRIG2O94898 1065 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 EFEMP2O95967 443 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 F10P00742 488 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 JUNP05412 331 aaKnown RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 GNA15P30679 374 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 HSD17B3P37058 310 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 KCNC1P48547 511 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 EVX1P49640 407 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CYP2J2P51589 502 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 PNLIPRP1P54315 467 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 DNAJB13P59910 316 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ARF5P84085 180 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 BNIP2Q12982 314 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 TPBGQ13641 420 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 LDLRAP1Q5SW96 308 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 SYCE2Q6PIF2 218 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 TMEM220Q6QAJ8 160 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF767PQ75MW2 155 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 DPPA4Q7L190 304 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 AMIGO2Q86SJ2 522 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CLEC10AQ8IUN9 316 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 LYSMD2Q8IV50 215 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF383Q8NA42 475 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 KBTBD8Q8NFY9 601 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 C12orf66Q96MD2 445 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ABHD1Q96SE0 405 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 NAPGQ99747 312 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 TMEM134Q9H6X4 195 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 PTGFRNQ9P2B2 879 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 SAE1Q9UBE0 346 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 FZD4Q9ULV1 537 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 TLR6Q9Y2C9 796 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 PITPNM2Q9BZ72 1349 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 SCN4AP35499 1836 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 PPIAL4EA0A075B759 164 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 PPIAL4CA0A0B4J2A2 164 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 FEZF1A0PJY2 475 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 PPIAL4DF5H284 164 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 CCSO14618 274 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 RPP14O95059 124 aaKnown RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 EPHX1P07099 455 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 PPIAL4FP0DN26 164 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 JUNDP17535 347 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 PTPN3P26045 913 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 FMO4P31512 558 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 GRIA4P48058 902 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 ST8SIA6P61647 398 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 LSM6P62312 80 aaKnown RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 CDKL1Q00532 357 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF543Q08ER8 600 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 PNOCQ13519 176 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 SNTB1Q13884 538 aaKnown RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 LCE2DQ5TA82 110 aaPredicted RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 GCNT7Q6ZNI0 430 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 SLC22A15Q8IZD6 547 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 OR4K15Q8NH41 348 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 OR2W6PQ8NHA6 318 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF420Q8TAQ5 688 aaPredicted RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 SKA2Q8WVK7 121 aaPredicted RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 ACOT12Q8WYK0 555 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 FKBP10Q96AY3 582 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 NSL1Q96IY1 281 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 SAMD8Q96LT4 415 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 PTCHD1Q96NR3 888 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 MXRA8Q9BRK3 442 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 NPLQ9BXD5 320 aaPredicted RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 CPVLQ9H3G5 476 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 RIOX1Q9H6W3 641 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 GBA2Q9HCG7 927 aaPredicted RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 FBXO8Q9NRD0 319 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 OLAHQ9NV23 265 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 TAS2R1Q9NYW7 299 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 WARS2Q9UGM6 360 aaKnown RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 TSPAN16Q9UKR8 245 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 CORO2BQ9UQ03 480 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 CXorf65A6NEN9 183 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 PRR33A8MZF0 331 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 E9PI62 339 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 PRMT5O14744 637 aaPredicted RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 PQBP1O60828 265 aaKnown RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 CBX7O95931 251 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 EPXP11678 715 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF26P17031 533 aaPredicted RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 SPRP35270 261 aaPredicted RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 KCNJ3P48549 501 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 EFNA5P52803 228 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 NOMO3P69849 1222 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 NFATC3Q12968 1075 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 GPR50Q13585 617 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 MED22Q15528 200 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 DPCR1Q3MIW9 517 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 BROXQ5VW32 411 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 GLB1LQ6UWU2 654 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 TAF8Q7Z7C8 310 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 SLC22A16Q86VW1 577 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 PTRH1Q86Y79 214 aaKnown RBP4.66□□□□□ -1.66
NPHP3-206ENST00000474871 ZSWIM2Q8NEG5 633 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 HASPINQ8TF76 798 aa4.66□□□□□ -1.66
NPHP3-206ENST00000474871 CKAP2Q8WWK9 683 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms