RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 ITCHQ96J02 903 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 SLC41A2Q96JW4 573 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 CLPTM1LQ96KA5 538 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 PPM1MQ96MI6 270 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 ANKRD27Q96NW4 1050 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 FCRL4Q96PJ5 515 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 OR52E6Q96RD3 313 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 SERINC2Q96SA4 455 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 CGREF1Q99674 301 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 MAP3K3Q99759 626 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 SORBS1Q9BX66 1292 aaKnown RBP6.28□□□□□ -1.4
ATG4A-207ENST00000474825 NPLQ9BXD5 320 aaPredicted RBP6.28□□□□□ -1.4
ATG4A-207ENST00000474825 EBPLQ9BY08 206 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 TRIM4Q9C037 500 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 GAREM1Q9H706 876 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 RMND5AQ9H871 391 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 IL21RQ9HBE5 538 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 ATAD3AQ9NVI7 634 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 CMTM6Q9NX76 183 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 SLC25A37Q9NYZ2 338 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 KCMF1Q9P0J7 381 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 SUCOQ9UBS9 1254 aaKnown RBP6.28□□□□□ -1.4
ATG4A-207ENST00000474825 CES1P1Q9UKY3 287 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 HEATR5BQ9P2D3 2071 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 FAM186AA6NE01 2351 aa6.28□□□□□ -1.4
ATG4A-207ENST00000474825 ARID1BQ8NFD5 2236 aaPredicted RBP6.27□□□□□ -1.4
ATG4A-207ENST00000474825 RIF1Q5UIP0 2472 aaKnown RBP6.27□□□□□ -1.4
ATG4A-207ENST00000474825 LOC105369274A0A096LPK9 316 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 IGHV5-51A0A0C4DH38 117 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 LOC102723532A0A0G2JNH3 316 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 A0A0J9YVX5 310 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 GNG14A0A1W2PPG7 69 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 C1orf226A1L170 272 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 SLC9B1P1A6NJY1 282 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 PATE3B3GLJ2 98 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 ERI3O43414 337 aaKnown RBP6.27□□□□□ -1.41
ATG4A-207ENST00000474825 PROM1O43490 865 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 HCRTR1O43613 425 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 SIGLEC6O43699 453 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 DUX1O43812 170 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 SH3BP5O60239 455 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 PRAMEF10O60809 474 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 GUCY1B2O75343 617 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 SH3BGRLO75368 114 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 BCAS2O75934 225 aaPredicted RBP6.27□□□□□ -1.41
ATG4A-207ENST00000474825 ZBTB11O95625 1053 aaPredicted RBP6.27□□□□□ -1.41
ATG4A-207ENST00000474825 IL3P08700 152 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 IFI6P09912 130 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 ANKRD34CP0C6C1 535 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 FAM58BPP0C7Q3 252 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 CKMT1AP12532 417 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 COX7A2P14406 83 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 ALOX12P18054 663 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 CDH3P22223 829 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 HTR1EP28566 365 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 ID4P47928 161 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 GZMMP51124 257 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 SLC7A2P52569 658 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 MAPK12P53778 367 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 OR1D5P58170 312 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 SNRPNP63162 240 aaKnown RBP6.27□□□□□ -1.41
ATG4A-207ENST00000474825 MS4A2Q01362 244 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 MC1RQ01726 317 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 GUCA2AQ02747 115 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 C2orf80Q0P641 193 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 BNIP2Q12982 314 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 FAM53BQ14153 422 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 TRIM25Q14258 630 aaKnown RBP6.27□□□□□ -1.41
ATG4A-207ENST00000474825 SLC9A5Q14940 896 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 NR0B2Q15466 257 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 HKDC1Q2TB90 917 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 LINC01559Q495D7 138 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 TRIM61Q5EBN2 209 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 TOR1AIP1Q5JTV8 583 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 CPTPQ5TA50 214 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 IRAK1BP1Q5VVH5 260 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 OR4F3Q6IEY1 312 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 NIPAL1Q6NVV3 410 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 TRIM40Q6P9F5 258 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 AAGABQ6PD74 315 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 PLXDC1Q8IUK5 500 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 MCATQ8IVS2 390 aaKnown RBP6.27□□□□□ -1.41
ATG4A-207ENST00000474825 OR4N4Q8N0Y3 316 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 TMEM132CQ8N3T6 1108 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 D2HGDHQ8N465 521 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 SVOPQ8N4V2 548 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 ZNF655Q8N720 491 aaPredicted RBP6.27□□□□□ -1.41
ATG4A-207ENST00000474825 ENDOVQ8N8Q3 282 aaKnown RBP6.27□□□□□ -1.41
ATG4A-207ENST00000474825 GOLM1Q8NBJ4 401 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 KCT2Q8NC54 265 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 VPS37AQ8NEZ2 397 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 OR5P2Q8WZ92 322 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 JADE3Q92613 823 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 NAT6Q93015 286 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 MIEF2Q96C03 454 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 C10orf90Q96M02 699 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 ZNF583Q96ND8 569 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 SH3GL1Q99961 368 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 DPYSL5Q9BPU6 564 aa6.27□□□□□ -1.41
ATG4A-207ENST00000474825 C17orf62Q9BQA9 187 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms