RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 ZCCHC10Q8TBK6 192 aa18.8■□□□□ 0.6
SSR1-204ENST00000474597 DNAJC9Q8WXX5 260 aa18.8■□□□□ 0.6
SSR1-204ENST00000474597 KLHL4Q9C0H6 718 aa18.8■□□□□ 0.6
SSR1-204ENST00000474597 ABCG4Q9H172 646 aa18.8■□□□□ 0.6
SSR1-204ENST00000474597 LYARQ9NX58 379 aaKnown RBP18.8■□□□□ 0.6
SSR1-204ENST00000474597 SUSD2Q9UGT4 822 aa18.8■□□□□ 0.6
SSR1-204ENST00000474597 RIMS3Q9UJD0 308 aa18.8■□□□□ 0.6
SSR1-204ENST00000474597 SNX11Q9Y5W9 270 aa18.8■□□□□ 0.6
SSR1-204ENST00000474597 HNRNPRO43390 633 aaKnown RBP18.79■□□□□ 0.6
SSR1-204ENST00000474597 PRAMEF10O60809 474 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 TDGF1P13385 188 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 PEX2P28328 305 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 CHI3L1P36222 383 aaPredicted RBP18.79■□□□□ 0.6
SSR1-204ENST00000474597 CAPZBP47756 277 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 ARRB1P49407 418 aaPredicted RBP18.79■□□□□ 0.6
SSR1-204ENST00000474597 GZMMP51124 257 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 GRAMD1BQ3KR37 738 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 MRM1Q6IN84 353 aaKnown RBP18.79■□□□□ 0.6
SSR1-204ENST00000474597 FRMPD2BQ6IN97 320 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 ZCCHC8Q6NZY4 707 aaKnown RBP18.79■□□□□ 0.6
SSR1-204ENST00000474597 FAM180BQ6P0A1 224 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 ERICH5Q6P6B1 374 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 ADGRG5Q8IZF4 528 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 UTP15Q8TED0 518 aaKnown RBP18.79■□□□□ 0.6
SSR1-204ENST00000474597 OR5P2Q8WZ92 322 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 ZBED6CLQ96FA7 236 aaPredicted RBP18.79■□□□□ 0.6
SSR1-204ENST00000474597 NLNQ9BYT8 704 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 IL21RQ9HBE5 538 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 EHD3Q9NZN3 535 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 C5AR2Q9P296 337 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 ASB4Q9Y574 426 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 CSNK1G3Q9Y6M4 447 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 V9GYQ6 96 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 SCN3AQ9NY46 2000 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 LOC105369274A0A096LPK9 316 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 LOC102723532A0A0G2JNH3 316 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 ZSCAN9O15535 394 aaPredicted RBP18.79■□□□□ 0.6
SSR1-204ENST00000474597 P2RX6O15547 441 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 ST6GAL1P15907 406 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 CTSKP43235 329 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 TAF11Q15544 211 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 OR4N4Q8N0Y3 316 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 LILRA2Q8N149 483 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 CLEC4FQ8N1N0 589 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 C10orf111Q8N326 155 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 C19orf47Q8N9M1 422 aaKnown RBP18.79■□□□□ 0.6
SSR1-204ENST00000474597 LRTOMTQ8WZ04 291 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 ELF4Q99607 663 aaPredicted RBP18.79■□□□□ 0.6
SSR1-204ENST00000474597 SPATA9Q9BWV2 254 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 UTS2RQ9UKP6 389 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 SNX8Q9Y5X2 465 aa18.79■□□□□ 0.6
SSR1-204ENST00000474597 CREG1O75629 220 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 TIPRLO75663 272 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 BNIP3Q12983 259 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 MANEAQ5SRI9 462 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 C6orf132Q5T0Z8 1188 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 CPZQ66K79 652 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 CATSPER1Q8NEC5 780 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 SEPHS2Q99611 448 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 RAD21L1Q9H4I0 556 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 NEUROD4Q9HD90 331 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 ATG4BQ9Y4P1 393 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 LRRC42Q9Y546 428 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 GMEB1Q9Y692 573 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 SDK1Q7Z5N4 2213 aa18.78■□□□□ 0.6
SSR1-204ENST00000474597 KRT75O95678 551 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 FCGR1AP12314 374 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 UQCRC2P22695 453 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 NTSP30990 170 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 CRATP43155 626 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 RGNQ15493 299 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 ZC3H12BQ5HYM0 836 aaKnown RBP18.77■□□□□ 0.6
SSR1-204ENST00000474597 OGFRL1Q5TC84 451 aaPredicted RBP18.77■□□□□ 0.6
SSR1-204ENST00000474597 IZUMO2Q6UXV1 221 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 DGLUCYQ7Z3D6 616 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 GPR155Q7Z3F1 870 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 OR5AK3PQ8NH89 298 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 AHCYL2Q96HN2 611 aaKnown RBP18.77■□□□□ 0.6
SSR1-204ENST00000474597 TRAPPC9Q96Q05 1148 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 SERINC2Q96SA4 455 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 ZNF184Q99676 751 aaPredicted RBP18.77■□□□□ 0.6
SSR1-204ENST00000474597 UGT2B28Q9BY64 529 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 C1GALT1Q9NS00 363 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 TAS2R7Q9NYW3 318 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 LRIT1Q9P2V4 623 aa18.77■□□□□ 0.6
SSR1-204ENST00000474597 TNRC6BQ9UPQ9 1833 aaKnown RBP18.77■□□□□ 0.6
SSR1-204ENST00000474597 A0A1W2PR48 441 aa18.77■□□□□ 0.59
SSR1-204ENST00000474597 B3GALT2O43825 422 aa18.77■□□□□ 0.59
SSR1-204ENST00000474597 KCNK5O95279 499 aa18.77■□□□□ 0.59
SSR1-204ENST00000474597 C1QCP02747 245 aa18.77■□□□□ 0.59
SSR1-204ENST00000474597 FASP25445 335 aa18.77■□□□□ 0.59
SSR1-204ENST00000474597 EPHA4P54764 986 aa18.77■□□□□ 0.59
SSR1-204ENST00000474597 PCBP4P57723 403 aaKnown RBP18.77■□□□□ 0.59
SSR1-204ENST00000474597 VSX2P58304 361 aaPredicted RBP18.77■□□□□ 0.59
SSR1-204ENST00000474597 HSPB3Q12988 150 aa18.77■□□□□ 0.59
SSR1-204ENST00000474597 VMACQ2NL98 169 aa18.77■□□□□ 0.59
SSR1-204ENST00000474597 PLK5Q496M5 336 aa18.77■□□□□ 0.59
SSR1-204ENST00000474597 DEFB134Q4QY38 66 aa18.77■□□□□ 0.59
SSR1-204ENST00000474597 FAM98BQ52LJ0 330 aaKnown RBP18.77■□□□□ 0.59
SSR1-204ENST00000474597 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.77■□□□□ 0.595e-8■□□□□ 10.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms