RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 FBXW11Q9UKB1 542 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 TRAF3IP3Q9Y228 551 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF510Q9Y2H8 683 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 TMEM98Q9Y2Y6 226 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 MRPL11Q9Y3B7 192 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 TMEM184BQ9Y519 407 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 SPAG17Q6Q759 2223 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 SMG1Q96Q15 3661 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 NFASCO94856 1347 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 FANCMQ8IYD8 2048 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 SCN2AQ99250 2005 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CEP192Q8TEP8 1941 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PI4KAP42356 2102 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 DMXL1Q9Y485 3027 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 A0A087X0T9 212 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 FAM237BA0A1B0GVD1 139 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 A0A1W2PN81 502 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 GSTTP1A0A1W2PQM5 241 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 MACROD2A1Z1Q3 448 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 GTPBP10A4D1E9 387 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 GOLGA8IPA6NC78 632 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ZSCAN5CA6NGD5 496 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 GOLGA8JA6NMD2 632 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 LRRIQ3A6PVS8 624 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 A8MXK9 166 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 B4E171 279 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ANKRD63C9JTQ0 380 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 F8VZ95 297 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 LOC400499M0QZD8 3231 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 KIF2AO00139 706 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PDXKO00764 312 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 MAP2K7O14733 419 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CETN3O15182 167 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 SLC16A4O15374 487 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ZSCAN12O43309 604 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 BUB1O43683 1085 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CALUO43852 315 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 FAM189A1O60320 539 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PAGE4O60829 102 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ZBED4O75132 1171 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 TBCAO75347 108 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 SLC25A12O75746 678 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 LYPLA2O95372 231 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 SLU7O95391 586 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PIGNO95427 931 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 GGPS1O95749 300 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CALCAP01258 141 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PGK2P07205 417 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 HOXC4P09017 264 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 SPARCP09486 303 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC175P0C221 793 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 IQCF3P0C7M6 154 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 SUPT20HL2P0C7V6 817 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 FAM228BP0C875 321 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF286BP0CG31 522 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 EPB41P11171 864 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 SELLP14151 372 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 UCHL3P15374 230 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 GAP43P17677 238 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 TRIM21P19474 475 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 EFNA1P20827 205 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 MUTP22033 750 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 GLRA2P23416 452 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PON1P27169 355 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CCND2P30279 289 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 YWHABP31946 246 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 EPHX2P34913 555 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CHRNA7P36544 502 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PPP1R2P41236 205 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 TSPAN7P41732 249 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PRKCIP41743 596 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 QARSP47897 775 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 MARCKSL1P49006 195 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 LMAN1P49257 510 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 DNA2P51530 1060 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CCR9P51686 369 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PEX3P56589 373 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 TAS2R40P59535 323 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 POLR2FP61218 127 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 RPS3AP61247 264 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 HERV-K104P61576 105 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 GNG11P61952 73 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PSMC5P62195 406 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 VSNL1P62760 191 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 MRPS25P82663 173 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ZBED6P86452 979 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 GTF2BQ00403 316 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 FKBP3Q00688 224 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 MYL7Q01449 175 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PRKCZQ05513 592 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 GFPT1Q06210 699 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ARHGAP1Q07960 439 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 C2orf54Q08AI8 447 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 BFSP1Q12934 665 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 EMC2Q15006 297 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PTPN14Q15678 1187 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 NAB2Q15742 525 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 KNOP1Q1ED39 458 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 HSDL1Q3SXM5 330 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC40Q4G0X9 1142 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms