RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CHRNA6Q15825 494 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 FSCN1Q16658 493 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 NHLRC3Q5JS37 347 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 SAPCD1Q5SSQ6 148 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 MARCH8Q5T0T0 291 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 OTUD3Q5T2D3 398 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 VASNQ6EMK4 673 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TBPL2Q6SJ96 375 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PAQR3Q6TCH7 311 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 KLHL17Q6TDP4 642 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 ETV3LQ6ZN32 361 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 RTN4RL1Q86UN2 441 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 RNF130Q86XS8 419 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 MCOLN2Q8IZK6 566 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PELI3Q8N2H9 469 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 LCORLQ8N3X6 602 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 CERS5Q8N5B7 392 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PLBD2Q8NHP8 589 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 CLHC1Q8NHS4 586 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 WDR36Q8NI36 951 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 GLYATL2Q8WU03 294 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 NR4A3Q92570 626 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 OTULINQ96BN8 352 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 FOXRED1Q96CU9 486 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PPP1R36Q96LQ0 422 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 QRFPRQ96P65 431 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 VRK1Q99986 396 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 RBM4BQ9BQ04 359 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 RBM4Q9BWF3 364 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 NKX6-2Q9C056 277 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 MVB12BQ9H7P6 319 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 MRPS30Q9NP92 439 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 VSX1Q9NZR4 365 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 KCMF1Q9P0J7 381 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF112Q9UJU3 913 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 V9GYH0 126 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TEX13CA0A0J9YWL9 993 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 LOC100130705A0A1B0GUX0 176 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TCRBV7S3A2A0A539 114 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM74A7A6NL05 159 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 SMLR1H3BR10 107 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 POLRMTO00411 1230 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PDCD5O14737 125 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PRMT5O14744 637 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PER2O15055 1255 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TO15178 435 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PMM2O15305 246 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC7A4O43246 635 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 HPGDSO60760 199 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PAK4O96013 591 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 IFNGP01579 166 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 IGHA1P01876 353 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 MT-ND2P03891 347 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 ARSBP15848 533 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TFEBP19484 476 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 ACO1P21399 889 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 LPOP22079 712 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PAICSP22234 425 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TGFBR1P36897 503 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 CD86P42081 329 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 ATP4BP51164 291 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 MANFP55145 182 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 BTG1P62324 171 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 YWHAZP63104 245 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 FASTKQ14296 549 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 KYAT1Q16773 422 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TIMM50Q3ZCQ8 353 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 CDNFQ49AH0 187 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 MINDY4Q4G0A6 757 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM74A3Q4VXF1 159 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 XKR9Q5GH70 373 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 LCN1P1Q5VSP4 162 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TMEM198Q66K66 360 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 SCYL2Q6P3W7 929 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 MFSD7Q6UXD7 560 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF852Q6ZMS4 543 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 EIF3MQ7L2H7 374 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 CHMP1BQ7LBR1 199 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 DPPA2Q7Z7J5 298 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 RBM23Q86U06 439 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 STPG2Q8N412 459 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 MINDY1Q8N5J2 469 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 ATPAF2Q8N5M1 289 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 SHC3Q92529 594 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 NTPCRQ9BSD7 190 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 MARVELD1Q9BSK0 173 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 SYT17Q9BSW7 474 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 IL22Q9GZX6 179 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 NT5DC2Q9H857 520 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 AGO3Q9H9G7 860 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 UNKLQ9H9P5 680 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 ZFP64Q9NPA5 681 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 OLA1Q9NTK5 396 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 RBFOX1Q9NWB1 397 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 OBP2AQ9NY56 170 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TMOD3Q9NYL9 352 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 WWOXQ9NZC7 414 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 MED11Q9P086 117 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC9A2Q9UBY0 812 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 AFF4Q9UHB7 1163 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms