RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TRILQ7L0X0 811 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 STRA8Q7Z7C7 330 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 KRTAP1-3Q8IUG1 177 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 SCUBE1Q8IWY4 988 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 TMEM156Q8N614 296 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 SIMC1Q8NDZ2 872 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 OR56A3Q8NH54 315 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 CREB3L4Q8TEY5 395 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 FAM222BQ8WU58 562 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 NEIL2Q969S2 332 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 NCLNQ969V3 563 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 ZNF669Q96BR6 464 aaPredicted RBP8.64□□□□□ -1.03
VCL-204ENST00000472585 PDLIM2Q96JY6 352 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 SIGLEC10Q96LC7 697 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 BAG1Q99933 345 aaPredicted RBP8.64□□□□□ -1.03
VCL-204ENST00000472585 TTTY12Q9BZ98 90 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 BEX4Q9NWD9 120 aaPredicted RBP8.64□□□□□ -1.03
VCL-204ENST00000472585 ZFP69BQ9UJL9 534 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 FBXO5Q9UKT4 447 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 FBXW2Q9UKT8 454 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 ARHGAP21Q5T5U3 1957 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 A0A0G2JN53 185 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 RNF212BA8MTL3 300 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 INAFM1C9JVW0 142 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 FAM47E-STBD1D6RA91 191 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 GOLGA8MH3BSY2 632 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 AP3B1O00203 1094 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 WWP2O00308 870 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 SMAD7O15105 426 aaKnown RBP8.63□□□□□ -1.03
VCL-204ENST00000472585 PFDN6O15212 129 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 ENDOUP21128 410 aaKnown RBP8.63□□□□□ -1.03
VCL-204ENST00000472585 JAK1P23458 1154 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 SOX3P41225 446 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 MAGEA3P43357 314 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 MAGEA5P43359 124 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 VPS41P49754 854 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 SSR4P51571 173 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 CLCN2P51788 898 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 DCAF7P61962 342 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 CDK16Q00536 496 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 PLGLB1Q02325 96 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 THOC5Q13769 683 aaKnown RBP8.63□□□□□ -1.03
VCL-204ENST00000472585 HSP90AA5PQ58FG0 334 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 DUPD1Q68J44 220 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 TTC27Q6P3X3 843 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 CASC4Q6P4E1 433 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 POMZP3Q6PJE2 187 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 P3H2Q8IVL5 708 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 TMEM251Q8N6I4 163 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 ARMC2Q8NEN0 867 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 SCYL1Q96KG9 808 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 SMC6Q96SB8 1091 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 FAM129AQ9BZQ8 928 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 PLAC1Q9HBJ0 212 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 TIMMDC1Q9NPL8 285 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 PNO1Q9NRX1 252 aaKnown RBP8.63□□□□□ -1.03
VCL-204ENST00000472585 C20orf96Q9NUD7 363 aaPredicted RBP8.63□□□□□ -1.03
VCL-204ENST00000472585 SLC17A6Q9P2U8 582 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 SPRR3Q9UBC9 169 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 B4GALT7Q9UBV7 327 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 CBLCQ9ULV8 474 aa8.63□□□□□ -1.03
VCL-204ENST00000472585 YARS2Q9Y2Z4 477 aaKnown RBP8.63□□□□□ -1.03
VCL-204ENST00000472585 CHD3Q12873 2000 aaKnown RBP8.63□□□□□ -1.03
VCL-204ENST00000472585 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.62□□□□□ -1.03
VCL-204ENST00000472585 SDR42E2A6NKP2 422 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 H7C1Q1 480 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 ACOT7O00154 380 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 EIF3FO00303 357 aaPredicted RBP8.62□□□□□ -1.03
VCL-204ENST00000472585 BCKDKO14874 412 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 IPO7O95373 1038 aaKnown RBP8.62□□□□□ -1.03
VCL-204ENST00000472585 FGGP02679 453 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 AHSGP02765 367 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 TUBB4AP04350 444 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 C8GP07360 202 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 RFPL3SP0C7P2 107 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 RNH1P13489 461 aaKnown RBP8.62□□□□□ -1.03
VCL-204ENST00000472585 GRK3P35626 688 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 DNASE1L1P49184 302 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 WNT3P56703 355 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 REEP5Q00765 189 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 GPS1Q13098 491 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 C18orf21Q32NC0 220 aaPredicted RBP8.62□□□□□ -1.03
VCL-204ENST00000472585 C4orf22Q6V702 233 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 GSTA5Q7RTV2 222 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 RNF10Q8N5U6 811 aaKnown RBP8.62□□□□□ -1.03
VCL-204ENST00000472585 ZNF511Q8NB15 262 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 RELL2Q8NC24 303 aaPredicted RBP8.62□□□□□ -1.03
VCL-204ENST00000472585 NAXEQ8NCW5 288 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 PTPMT1Q8WUK0 201 aaPredicted RBP8.62□□□□□ -1.03
VCL-204ENST00000472585 SLC5A11Q8WWX8 675 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 LINGO1Q96FE5 620 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 COX4I2Q96KJ9 171 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 TSNARE1Q96NA8 513 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 SERPINB12Q96P63 405 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 RASL10BQ96S79 203 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 BDH2Q9BUT1 245 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 TSGA10Q9BZW7 698 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 PROK2Q9HC23 129 aa8.62□□□□□ -1.03
VCL-204ENST00000472585 IARS2Q9NSE4 1012 aaKnown RBP8.62□□□□□ -1.03
VCL-204ENST00000472585 TUBA8Q9NY65 449 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms