RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 CREB5Q02930 508 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 DRP2Q13474 957 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 ALCAMQ13740 583 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 GLIPR1L2Q4G1C9 344 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 GPR139Q6DWJ6 353 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 TMEM173Q86WV6 379 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-202ENST00000471307 CREBRFQ8IUR6 639 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 ARHGAP24Q8N264 748 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 FBXO39Q8N4B4 442 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 MCUQ8NE86 351 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 TCP11Q8WWU5 503 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 AZIN2Q96A70 460 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 DHTKD1Q96HY7 919 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-202ENST00000471307 RADILQ96JH8 1075 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 MS4A10Q96PG2 267 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 ZNF300Q96RE9 604 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-202ENST00000471307 PAFAH2Q99487 392 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 BPIFA3Q9BQP9 254 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 TEX12Q9BXU0 123 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 DHX33Q9H6R0 707 aaKnown RBP4.67□□□□□ -1.66
CCDC39-202ENST00000471307 PARVGQ9HBI0 331 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 SERINC1Q9NRX5 453 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 OR6C2Q9NZP2 312 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 RPS6KA6Q9UK32 745 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 NRCAMQ92823 1304 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 A0A1W2PQ09 198 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 hCG_1807616A0A1W2PRN6 198 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 TMEM150BA6NC51 233 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 PSMA7O14818 248 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 GLRA3O75311 464 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 CABYRO75952 493 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 PTMAP06454 111 aaKnown RBP4.66□□□□□ -1.66
CCDC39-202ENST00000471307 HSPA8P11142 646 aaKnown RBP4.66□□□□□ -1.66
CCDC39-202ENST00000471307 TMOD1P28289 359 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 SHC1P29353 583 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 HOXD13P35453 343 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 ARL2P36404 184 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 PAX9P55771 341 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 BEX3Q00994 111 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 STK4Q13043 487 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 MXD4Q14582 209 aaPredicted RBP4.66□□□□□ -1.66
CCDC39-202ENST00000471307 EMC2Q15006 297 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 ZNF239Q16600 458 aaKnown RBP4.66□□□□□ -1.66
CCDC39-202ENST00000471307 ODF4Q2M2E3 257 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 CCDC92Q53HC0 331 aaPredicted RBP4.66□□□□□ -1.66
CCDC39-202ENST00000471307 ZNF720Q7Z2F6 126 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 SZRD1Q7Z422 152 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 ADIPOR2Q86V24 386 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 KBTBD6Q86V97 674 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 MYOCDQ8IZQ8 938 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 DAW1Q8N136 415 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 GUF1Q8N442 669 aaKnown RBP4.66□□□□□ -1.66
CCDC39-202ENST00000471307 CHCHD4Q8N4Q1 142 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 SLCO2A1Q92959 643 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 IFT74Q96LB3 600 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 CDRT15Q96T59 188 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 RAD9AQ99638 391 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 MTG1Q9BT17 334 aaPredicted RBP4.66□□□□□ -1.66
CCDC39-202ENST00000471307 TXLNGYQ9BZA5 131 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 ST6GALNAC4Q9H4F1 302 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 PPANQ9NQ55 473 aaKnown RBP4.66□□□□□ -1.66
CCDC39-202ENST00000471307 XPNPEP1Q9NQW7 623 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 P4HTMQ9NXG6 502 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 RWDD2AQ9UIY3 292 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 KLK13Q9UKR3 277 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 PPP1R3CQ9UQK1 317 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 PHLPP2Q6ZVD8 1323 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 SYNRGQ9UMZ2 1314 aa4.66□□□□□ -1.66
CCDC39-202ENST00000471307 MBLAC1A4D2B0 266 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 C15orf61A6NNL5 157 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 CCDC169A6NNP5 214 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 RSPH10B2B2RC85 870 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 GOLGA6L19H0YKK7 550 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 PDXKO00764 312 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 CDK2AP2O75956 126 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 C22orf31O95567 290 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 DUS4LO95620 317 aaKnown RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 FGFR1OPO95684 399 aaKnown RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 BAG2O95816 211 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 CLDN1O95832 211 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 PGK1P00558 417 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 VTNP04004 478 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 ASGR1P07306 291 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 RSPH10BP0C881 870 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 ZNF286BP0CG31 522 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 SMIM10L2AP0DMW4 78 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 SMIM10L2BP0DMW5 78 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 PORP16435 677 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 CCNE1P24864 410 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 NAMPTP43490 491 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 LEPRP48357 1165 aaKnown RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 LBX1P52954 281 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 PEX3P56589 373 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 SNRPFP62306 86 aaKnown RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 TPM4P67936 248 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 KRT83P78385 493 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 CYCSP99999 105 aaKnown RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 GTF2BQ00403 316 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 MYL5Q02045 173 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms