RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 REG3GQ6UW15 175 aa2.53□□□□□ -2
TPR-204ENST00000469463 SIGLEC15Q6ZMC9 328 aa2.53□□□□□ -2
TPR-204ENST00000469463 MSANTD1Q6ZTZ1 278 aa2.53□□□□□ -2
TPR-204ENST00000469463 CEACAM19Q7Z692 300 aa2.53□□□□□ -2
TPR-204ENST00000469463 TUSC5Q8IXB3 177 aa2.53□□□□□ -2
TPR-204ENST00000469463 AQP12AQ8IXF9 295 aa2.53□□□□□ -2
TPR-204ENST00000469463 ZNF444Q8N0Y2 327 aaPredicted RBP2.53□□□□□ -2
TPR-204ENST00000469463 OR8H3Q8N146 312 aa2.53□□□□□ -2
TPR-204ENST00000469463 NME8Q8N427 588 aa2.53□□□□□ -2
TPR-204ENST00000469463 CCDC197Q8NCU1 140 aa2.53□□□□□ -2
TPR-204ENST00000469463 CKAP2Q8WWK9 683 aa2.53□□□□□ -2
TPR-204ENST00000469463 MR1Q95460 341 aa2.53□□□□□ -2
TPR-204ENST00000469463 AP2M1Q96CW1 435 aa2.53□□□□□ -2
TPR-204ENST00000469463 RUNDC3BQ96NL0 473 aa2.53□□□□□ -2
TPR-204ENST00000469463 PRMT1Q99873 361 aaKnown RBP2.53□□□□□ -2
TPR-204ENST00000469463 C17orf62Q9BQA9 187 aa2.53□□□□□ -2
TPR-204ENST00000469463 ZNF559Q9BR84 538 aa2.53□□□□□ -2
TPR-204ENST00000469463 UTP14AQ9BVJ6 771 aaKnown RBP2.53□□□□□ -2
TPR-204ENST00000469463 PINK1Q9BXM7 581 aa2.53□□□□□ -2
TPR-204ENST00000469463 ZWILCHQ9H900 591 aa2.53□□□□□ -2
TPR-204ENST00000469463 NMUR1Q9HB89 426 aa2.53□□□□□ -2
TPR-204ENST00000469463 TUFT1Q9NNX1 390 aa2.53□□□□□ -2
TPR-204ENST00000469463 ZCCHC17Q9NP64 241 aaKnown RBP2.53□□□□□ -2
TPR-204ENST00000469463 FAM120CQ9NX05 1096 aaKnown RBP2.53□□□□□ -2
TPR-204ENST00000469463 ZNF319Q9P2F9 582 aa2.53□□□□□ -2
TPR-204ENST00000469463 ABCD2Q9UBJ2 740 aa2.53□□□□□ -2
TPR-204ENST00000469463 GPR132Q9UNW8 380 aa2.53□□□□□ -2
TPR-204ENST00000469463 ABCA7Q8IZY2 2146 aa2.53□□□□□ -2.01
TPR-204ENST00000469463 PFASO15067 1338 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 IGLV3-10A0A075B6K4 115 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 A0A1W2PPR1 153 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 IGLON5A6NGN9 336 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 M0R296 226 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 FBP2O00757 339 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 CHUKO15111 745 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 GPRIN2O60269 458 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 RAD51DO75771 328 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 MT-ND1P03886 318 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 SKILP12757 684 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 EDNRAP25101 427 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 ACKR3P25106 362 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 TIA1P31483 386 aaKnown RBP eCLIP2.52□□□□□ -2.01
TPR-204ENST00000469463 SLC1A4P43007 532 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 ADARP55265 1226 aaKnown RBP2.52□□□□□ -2.01
TPR-204ENST00000469463 RPS27AP62979 156 aaKnown RBP2.52□□□□□ -2.01
TPR-204ENST00000469463 GSTO1P78417 241 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 AGAP7PQ5VUJ5 663 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 SEL1L3Q68CR1 1132 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 NEPROQ6NW34 567 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 EMBQ6PCB8 327 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 TMUB2Q71RG4 321 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 CARM1Q86X55 608 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 TBC1D10CQ8IV04 446 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 C4orf32Q8N8J7 132 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 ATAD1Q8NBU5 361 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 OR6F1Q8NGZ6 308 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 SSC4DQ8WTU2 575 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 PARK7Q99497 189 aaKnown RBP2.52□□□□□ -2.01
TPR-204ENST00000469463 CCDC28BQ9BUN5 200 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 ZNF665Q9H7R5 613 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 SRD5A3Q9H8P0 318 aa2.52□□□□□ -2.01
TPR-204ENST00000469463 NOTCH2Q04721 2471 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 KIAA1217Q5T5P2 1943 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 TEX48A0A1B0GUV7 120 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 SRRM5B3KS81 715 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 NEDD8-MDP1E9PL57 170 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 LRRTM2O43300 516 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 DUSP11O75319 330 aaKnown RBP2.51□□□□□ -2.01
TPR-204ENST00000469463 GLCEO94923 617 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 FGF19O95750 216 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 GSTA2P09210 222 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 OR9G9P0C7N8 305 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 C8orf89P0DMQ9 161 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 CASTP20810 708 aaKnown RBP2.51□□□□□ -2.01
TPR-204ENST00000469463 PPP2R1AP30153 589 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 SPRP35270 261 aaPredicted RBP2.51□□□□□ -2.01
TPR-204ENST00000469463 IER3P46695 156 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 SLC1A6P48664 564 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 GSK3BP49841 420 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 CRMP1Q14194 572 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 LRRC38Q5VT99 294 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 ZNF776Q68DI1 518 aaPredicted RBP2.51□□□□□ -2.01
TPR-204ENST00000469463 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 OTOAQ7RTW8 1153 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 THEM5Q8N1Q8 247 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 LINC00612Q8N6U2 182 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 TMEM99Q8N816 258 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 ICA1LQ8NDH6 482 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 SPATA18Q8TC71 538 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 GANCQ8TET4 914 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 PCNPQ8WW12 178 aaKnown RBP2.51□□□□□ -2.01
TPR-204ENST00000469463 TEKT1Q969V4 418 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 CDKN2AIPNLQ96HQ2 116 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 RCHY1Q96PM5 261 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 ALKBH3Q96Q83 286 aaPredicted RBP2.51□□□□□ -2.01
TPR-204ENST00000469463 LRRC2Q9BYS8 371 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 FNDC4Q9H6D8 234 aaPredicted RBP2.51□□□□□ -2.01
TPR-204ENST00000469463 SLCO1C1Q9NYB5 712 aa2.51□□□□□ -2.01
TPR-204ENST00000469463 PLEK2Q9NYT0 353 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms