RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SEMA4BQ9NPR2 832 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-204ENST00000469207 ZNF490Q9ULM2 529 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-204ENST00000469207 PPIEQ9UNP9 301 aaKnown RBP11.39□□□□□ -0.59
HDAC3-204ENST00000469207 YARS2Q9Y2Z4 477 aaKnown RBP11.39□□□□□ -0.59
HDAC3-204ENST00000469207 MMACHCQ9Y4U1 282 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 TEX264Q9Y6I9 313 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 INTS1Q8N201 2190 aaKnown RBP11.38□□□□□ -0.59
HDAC3-204ENST00000469207 ZNF469Q96JG9 3925 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-204ENST00000469207 FAM95CA0A1B0GW59 222 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 A8MVJ9 347 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 LDB3O75112 727 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 H2AFYO75367 372 aaKnown RBP11.38□□□□□ -0.59
HDAC3-204ENST00000469207 SH3BGRLO75368 114 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 TUBB4AP04350 444 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 CELA3AP09093 270 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 CERS1P27544 350 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 MSX1P28360 303 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 CHRNB4P30926 498 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 GMPRP36959 345 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 MAGEA5P43359 124 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 SLC6A12P48065 614 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 LIM2P55344 173 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 HSD17B7P56937 341 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 STXBP1P61764 594 aaKnown RBP11.38□□□□□ -0.59
HDAC3-204ENST00000469207 FASTKD3Q14CZ7 662 aaKnown RBP11.38□□□□□ -0.59
HDAC3-204ENST00000469207 RTL6Q6ICC9 239 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 ZC3HC1Q86WB0 502 aaKnown RBP11.38□□□□□ -0.59
HDAC3-204ENST00000469207 LIX1LQ8IVB5 337 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 EID3Q8N140 333 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 OR5M3Q8NGP4 307 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 OR10Q1Q8NGQ4 319 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 GABPB2Q8TAK5 448 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-204ENST00000469207 ASB5Q8WWX0 329 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 ASB15Q8WXK1 588 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 GAL3ST3Q96A11 431 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 SCYL1Q96KG9 808 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 CAPZA3Q96KX2 299 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 F2RL3Q96RI0 385 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 RASL10BQ96S79 203 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 NAP1L3Q99457 506 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-204ENST00000469207 CCDC77Q9BR77 488 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 CNPPD1Q9BV87 410 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 ALOXE3Q9BYJ1 711 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 CAB39LQ9H9S4 337 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 PRDM7Q9NQW5 492 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 HPF1Q9NWY4 346 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 MYOTQ9UBF9 498 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 OARD1Q9Y530 152 aa11.38□□□□□ -0.59
HDAC3-204ENST00000469207 DNAJC13O75165 2243 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 RTCAO00442 366 aaKnown RBP11.37□□□□□ -0.59
HDAC3-204ENST00000469207 CLDN4O14493 209 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 B3GALT2O43825 422 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 GNAZP19086 355 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 DNASE1L1P49184 302 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 HK2P52789 917 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 ART1P52961 327 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 DLX5P56178 289 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 TERF2Q15554 542 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 STEAP4Q687X5 459 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 ABHD17CQ6PCB6 329 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 UBE3DQ7Z6J8 389 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 OR4N5Q8IXE1 308 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 KLHL7Q8IXQ5 586 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 PDIK1LQ8N165 341 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 NKAPQ8N5F7 415 aaKnown RBP11.37□□□□□ -0.59
HDAC3-204ENST00000469207 TMEM251Q8N6I4 163 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 MAPKAP1Q9BPZ7 522 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 TMEM79Q9BSE2 394 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 NAT9Q9BTE0 207 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 NPLQ9BXD5 320 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-204ENST00000469207 OR8D2Q9GZM6 311 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 REXO4Q9GZR2 422 aaKnown RBP11.37□□□□□ -0.59
HDAC3-204ENST00000469207 LIME1Q9H400 295 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 ZDHHC11Q9H8X9 412 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 ADAP2Q9NPF8 381 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 SMYD2Q9NRG4 433 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 ALKBH4Q9NXW9 302 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 CTNNAL1Q9UBT7 734 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 DAPP1Q9UN19 280 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 MTO1Q9Y2Z2 717 aaKnown RBP11.37□□□□□ -0.59
HDAC3-204ENST00000469207 FAM215AQ9Y5M1 114 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 CLCA3PQ9Y6N3 262 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 SPG11Q96JI7 2443 aa11.37□□□□□ -0.59
HDAC3-204ENST00000469207 PRRC2AP48634 2157 aaKnown RBP11.36□□□□□ -0.59
HDAC3-204ENST00000469207 A0A0G2JNJ9 132 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 GOLGA6L10A0A0M3HER8 536 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 ATP6AP2A0A1C7CYW4 349 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 ANKDD1BA6NHY2 528 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 FANCGO15287 622 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 TP73O15350 636 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 CTNSO60931 367 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 ATP6AP2O75787 350 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 GLSO94925 669 aaPredicted RBP11.36□□□□□ -0.59
HDAC3-204ENST00000469207 ETHE1O95571 254 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 HOXD4P09016 255 aaPredicted RBP11.36□□□□□ -0.59
HDAC3-204ENST00000469207 GLI4P10075 376 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 CCL3P10147 92 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 TNNI3P19429 210 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 CD22P20273 847 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 CNR1P21554 472 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms