RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZFC3H1O60293 1989 aaKnown RBP11.84□□□□□ -0.51
USP11-206ENST00000469080 GLOD5A6NK44 160 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 STK25O00506 426 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 ZNF197O14709 1029 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 TAPBPO15533 448 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 GMDSO60547 372 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 PTP4A3O75365 173 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 C1SP09871 688 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 RNF144AP50876 292 aaPredicted RBP11.84□□□□□ -0.51
USP11-206ENST00000469080 ENPP6Q6UWR7 440 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 KIF18BQ86Y91 864 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 FAM86B1Q8N7N1 296 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 ZNF740Q8NDX6 193 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 ASZ1Q8WWH4 475 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 SLC13A3Q8WWT9 602 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 MAL2Q969L2 176 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 L3HYPDHQ96EM0 354 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 ASB2Q96Q27 587 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 SMAD5Q99717 465 aaKnown RBP11.84□□□□□ -0.51
USP11-206ENST00000469080 CD244Q9BZW8 370 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 ZBP1Q9H171 429 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 RIBC2Q9H4K1 309 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 RANBP3Q9H6Z4 567 aaPredicted RBP11.84□□□□□ -0.51
USP11-206ENST00000469080 PFDN2Q9UHV9 154 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 STOML2Q9UJZ1 356 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 KCNK6Q9Y257 313 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 DOCK4Q8N1I0 1966 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 A0A1W2PP18 115 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 CATP04040 527 aaKnown RBP11.84□□□□□ -0.51
USP11-206ENST00000469080 GPC1P35052 558 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 RPS9P46781 194 aaKnown RBP11.84□□□□□ -0.51
USP11-206ENST00000469080 C9orf50Q5SZB4 431 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 KANK2Q63ZY3 851 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 ANKRD33Q7Z3H0 272 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 COMMD7Q86VX2 200 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 EPHX4Q8IUS5 362 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 C1orf52Q8N6N3 182 aaKnown RBP11.84□□□□□ -0.51
USP11-206ENST00000469080 RHEBL1Q8TAI7 183 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 RORBQ92753 470 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 MYRFLQ96LU7 910 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 PCDHB16Q9NRJ7 776 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 GPRC5BQ9NZH0 403 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 KIF17Q9P2E2 1029 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 IL36AQ9UHA7 158 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 ACSL6Q9UKU0 697 aa11.84□□□□□ -0.51
USP11-206ENST00000469080 E7EQ34 232 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 CYP7B1O75881 506 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 MED26O95402 600 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 JUNBP17275 347 aaPredicted RBP11.83□□□□□ -0.52
USP11-206ENST00000469080 HOXB8P17481 243 aaPredicted RBP11.83□□□□□ -0.52
USP11-206ENST00000469080 EPORP19235 508 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 MTHFRP42898 656 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 TEKQ02763 1124 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 FAPQ12884 760 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 GPAT3Q53EU6 434 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 P2RY8Q86VZ1 359 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 CMTR2Q8IYT2 770 aaKnown RBP11.83□□□□□ -0.52
USP11-206ENST00000469080 OR4M1Q8NGD0 313 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 OR14C36Q8NHC7 312 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 LRRC3BQ96PB8 259 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 RAD9AQ99638 391 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 TAS2R7Q9NYW3 318 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 MAP4K5Q9Y4K4 846 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 ANKRD36A6QL64 1941 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 MEIOCA2RUB1 952 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 PRRT4C9JH25 899 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 PPM1BO75688 479 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 RPS17P08708 135 aaKnown RBP11.83□□□□□ -0.52
USP11-206ENST00000469080 BCKDHAP12694 445 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 ACP5P13686 325 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 RPS14P62263 151 aaKnown RBP11.83□□□□□ -0.52
USP11-206ENST00000469080 BNC1Q01954 994 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 CAMK2GQ13555 558 aaPredicted RBP11.83□□□□□ -0.52
USP11-206ENST00000469080 BLOC1S3Q6QNY0 202 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 PIK3C3Q8NEB9 887 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 RHBDF1Q96CC6 855 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 DNAJC11Q9NVH1 559 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 FBXL12Q9NXK8 326 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 CHD5Q8TDI0 1954 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 MYLKQ15746 1914 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 SPAG17Q6Q759 2223 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 TBC1D3DA0A087WVF3 549 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 TBC1D3IA0A087WXS9 549 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 TBC1D3EA0A087X179 549 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 TBC1D3KA0A087X1G2 549 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.83□□□□□ -0.52
USP11-206ENST00000469080 TBC1D3FA6NER0 549 aaPredicted RBP11.83□□□□□ -0.52
USP11-206ENST00000469080 OTOL1A6NHN0 477 aaPredicted RBP11.83□□□□□ -0.52
USP11-206ENST00000469080 TBC1D3LB9A6J9 549 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 MANBAO00462 879 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 TBC1D3HP0C7X1 549 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 BMP2P12643 396 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 ERP29P30040 261 aaKnown RBP11.83□□□□□ -0.52
USP11-206ENST00000469080 MC1RQ01726 317 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 TBC1D3GQ6DHY5 549 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 TBC1D3CQ6IPX1 549 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 TBC1D3Q8IZP1 549 aaPredicted RBP11.83□□□□□ -0.52
USP11-206ENST00000469080 OR4M2Q8NGB6 313 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 TEX47Q8TBZ9 253 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 RPL3LQ92901 407 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms