RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 EEF2KMTQ96G04 330 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 GUCD1Q96NT3 240 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 TMEM237Q96Q45 408 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 CCM2Q9BSQ5 444 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 DHX29Q7Z478 1369 aaKnown RBP4.35□□□□□ -1.71
LSM5-209ENST00000468872 CDK12Q9NYV4 1490 aaPredicted RBP4.35□□□□□ -1.71
LSM5-209ENST00000468872 hCG_38984A0A1B0GV85 526 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 ATP6AP2A0A1C7CYW4 349 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 TLR4O00206 839 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 SIGLEC5O15389 551 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 P2RX6O15547 441 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 HTATSF1O43719 755 aaKnown RBP4.34□□□□□ -1.71
LSM5-209ENST00000468872 TLX2O43763 284 aaPredicted RBP4.34□□□□□ -1.71
LSM5-209ENST00000468872 EDIL3O43854 480 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 CEACAM4O75871 244 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 IGLV1-44P01699 117 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 MYOGP15173 224 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 TYMPP19971 482 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 C4BPBP20851 252 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 FEN1P39748 380 aaKnown RBP4.34□□□□□ -1.71
LSM5-209ENST00000468872 MMP12P39900 470 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 VEGFCP49767 419 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 SLC12A3P55017 1021 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 CASP9P55211 416 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 GIT2Q14161 759 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 TMEM187Q14656 261 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 SPHARQ15513 63 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 HLA-BQ31612 363 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 B3GLCTQ6Y288 498 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 TMEM64Q6YI46 380 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 Q6ZVQ6 151 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 SIDT2Q8NBJ9 832 aaKnown RBP4.34□□□□□ -1.71
LSM5-209ENST00000468872 DTD2Q96FN9 168 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 ZNF560Q96MR9 790 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 ZNF300Q96RE9 604 aaPredicted RBP4.34□□□□□ -1.71
LSM5-209ENST00000468872 RBM4Q9BWF3 364 aaKnown RBP4.34□□□□□ -1.71
LSM5-209ENST00000468872 HOXD1Q9GZZ0 328 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 ZNF665Q9H7R5 613 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 KCNMB3Q9NPA1 279 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 ZCCHC3Q9NUD5 404 aaKnown RBP4.34□□□□□ -1.71
LSM5-209ENST00000468872 ANO10Q9NW15 660 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 KLHL8Q9P2G9 620 aaPredicted RBP4.34□□□□□ -1.71
LSM5-209ENST00000468872 IL19Q9UHD0 177 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 CSNK1G3Q9Y6M4 447 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 SPAG9O60271 1321 aaKnown RBP4.34□□□□□ -1.71
LSM5-209ENST00000468872 CUX1P39880 1505 aa4.34□□□□□ -1.71
LSM5-209ENST00000468872 UTRNP46939 3433 aa4.34□□□□□ -1.72
LSM5-209ENST00000468872 KIAA0586Q9BVV6 1533 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 CFTRP13569 1480 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 RAD54L2Q9Y4B4 1467 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 PTPRKQ15262 1439 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 A0A0U1RQG5 324 aaPredicted RBP4.33□□□□□ -1.72
LSM5-209ENST00000468872 SYCE3A1L190 88 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 ANHXE9PGG2 379 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 NPIPB9F8W1W9 429 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 SLC28A1O00337 649 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 ZNF821O75541 412 aaPredicted RBP4.33□□□□□ -1.72
LSM5-209ENST00000468872 MMP10P09238 476 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 ANPEPP15144 967 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 TSFMP43897 325 aaKnown RBP4.33□□□□□ -1.72
LSM5-209ENST00000468872 SLC6A12P48065 614 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 HUNKP57058 714 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 EVCP57679 992 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 STARD6P59095 220 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 GALK2Q01415 458 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 MSLNQ13421 630 aaPredicted RBP4.33□□□□□ -1.72
LSM5-209ENST00000468872 DRP2Q13474 957 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 ZFP69Q49AA0 526 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 LYPLAL1Q5VWZ2 237 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 CES4AQ5XG92 561 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 RFPL4BQ6ZWI9 263 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 CYP4V2Q6ZWL3 525 aaPredicted RBP4.33□□□□□ -1.72
LSM5-209ENST00000468872 ZNF619Q8N2I2 560 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 FBXW8Q8N3Y1 598 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 NEK11Q8NG66 645 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 OR4A16Q8NH70 328 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 URGCPQ8TCY9 931 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 GPR148Q8TDV2 347 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 CHURC1Q8WUH1 139 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 OVOL2Q9BRP0 275 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 FAM213AQ9BRX8 229 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 PAPOLGQ9BWT3 736 aaKnown RBP4.33□□□□□ -1.72
LSM5-209ENST00000468872 NUSAP1Q9BXS6 441 aaKnown RBP4.33□□□□□ -1.72
LSM5-209ENST00000468872 DGCR6LQ9BY27 220 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 CARD9Q9H257 536 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 C3orf14Q9HBI5 128 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 EXOC7Q9UPT5 735 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 ERVK-19Q9WJR5 959 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 SH3GLB1Q9Y371 365 aa4.33□□□□□ -1.72
LSM5-209ENST00000468872 EPRSP07814 1512 aaKnown RBP4.32□□□□□ -1.72
LSM5-209ENST00000468872 BCL9LQ86UU0 1499 aa4.32□□□□□ -1.72
LSM5-209ENST00000468872 SNED1Q8TER0 1413 aa4.32□□□□□ -1.72
LSM5-209ENST00000468872 RNF123Q5XPI4 1314 aa4.32□□□□□ -1.72
LSM5-209ENST00000468872 SLC9B1P1A6NJY1 282 aa4.32□□□□□ -1.72
LSM5-209ENST00000468872 B4GAT1O43505 415 aa4.32□□□□□ -1.72
LSM5-209ENST00000468872 PRDM1O75626 825 aa4.32□□□□□ -1.72
LSM5-209ENST00000468872 NXPH2O95156 264 aa4.32□□□□□ -1.72
LSM5-209ENST00000468872 CPNE6O95741 557 aa4.32□□□□□ -1.72
LSM5-209ENST00000468872 CALCAP01258 141 aa4.32□□□□□ -1.72
LSM5-209ENST00000468872 EPOP01588 193 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms