RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 ADH7P40394 386 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 MAGEA5P43359 124 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 HK2P52789 917 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 STXBP1P61764 594 aaKnown RBP12.12□□□□□ -0.47
PTPN7-207ENST00000468385 CCZ1BP86790 482 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 CCZ1P86791 482 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-207ENST00000468385 SLC13A2Q13183 592 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 ELAVL1Q15717 326 aaKnown RBP12.12□□□□□ -0.47
PTPN7-207ENST00000468385 CYP1B1Q16678 543 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 BBS9Q3SYG4 887 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 SPANXN3Q5MJ09 141 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 CCDC137Q6PK04 289 aaKnown RBP12.12□□□□□ -0.47
PTPN7-207ENST00000468385 GAS2L3Q86XJ1 694 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 PPIL6Q8IXY8 311 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 ZNF595Q8IYB9 648 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 ZZZ3Q8IYH5 903 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 MMP21Q8N119 569 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 RASGEF1CQ8N431 466 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 FAM109AQ8N4B1 249 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 GPATCH11Q8N954 259 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 FAM47BQ8NA70 645 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 CHDHQ8NE62 594 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-207ENST00000468385 MYRIPQ8NFW9 859 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 TRIM58Q8NG06 486 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 GABPB2Q8TAK5 448 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-207ENST00000468385 SREK1Q8WXA9 508 aaKnown RBP12.12□□□□□ -0.47
PTPN7-207ENST00000468385 MS4A6EQ96DS6 147 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 PDLIM5Q96HC4 596 aaKnown RBP12.12□□□□□ -0.47
PTPN7-207ENST00000468385 MS4A14Q96JA4 679 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 FAR2Q96K12 515 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 SCYL1Q96KG9 808 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 QRFPRQ96P65 431 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 CSF3RQ99062 836 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 FAM173AQ9BQD7 235 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 IL1RL2Q9HB29 575 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 PLAC1Q9HBJ0 212 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 ST6GALNAC2Q9UJ37 374 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 VWA7Q9Y334 891 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 KCNE2Q9Y6J6 123 aa12.12□□□□□ -0.47
PTPN7-207ENST00000468385 DNAJC13O75165 2243 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 LRIT2A6NDA9 550 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 CYR61O00622 381 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 CLDN4O14493 209 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 AQP7O14520 342 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 ERI3O43414 337 aaKnown RBP12.11□□□□□ -0.47
PTPN7-207ENST00000468385 NRDCO43847 1150 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 TTC4O95801 387 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 CELA3AP09093 270 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 SAT1P21673 171 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 DNASE1L1P49184 302 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 FOXO1Q12778 655 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 BMPR2Q13873 1038 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 SNTB1Q13884 538 aaKnown RBP12.11□□□□□ -0.47
PTPN7-207ENST00000468385 CEBPEQ15744 281 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 HYAL4Q2M3T9 481 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 MSS51Q4VC12 460 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 TEDDM1Q5T9Z0 273 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 RNASEH2BQ5TBB1 312 aaKnown RBP12.11□□□□□ -0.47
PTPN7-207ENST00000468385 FAM45BPQ6NSW5 357 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 ARSKQ6UWY0 536 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 HSDL2Q6YN16 418 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 RTL4Q6ZR62 310 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 GK5Q6ZS86 529 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 CLNKQ7Z7G1 428 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 IGDCC3Q8IVU1 814 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 KLHDC8AQ8IYD2 350 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 TMEM132CQ8N3T6 1108 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 ZNF321PQ8N8H1 164 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 FAM45AQ8TCE6 357 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 PTPMT1Q8WUK0 201 aaPredicted RBP12.11□□□□□ -0.47
PTPN7-207ENST00000468385 CERS2Q96G23 380 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 GPATCH1Q9BRR8 931 aaKnown RBP12.11□□□□□ -0.47
PTPN7-207ENST00000468385 POLDIP3Q9BY77 421 aaKnown RBP12.11□□□□□ -0.47
PTPN7-207ENST00000468385 DLL4Q9NR61 685 aa12.11□□□□□ -0.47
PTPN7-207ENST00000468385 MYOCOSA0A1B0GUC4 107 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 CDC7O00311 574 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 B3GALT2O43825 422 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 SUSD5O60279 629 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 WDR1O75083 606 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 IFNA16P05015 189 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 C1GALT1C1LP0DN25 315 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 LIM2P55344 173 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 PPP2R2AP63151 447 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 CDKL1Q00532 357 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 FOXD4Q12950 439 aaPredicted RBP12.1□□□□□ -0.47
PTPN7-207ENST00000468385 SLBPQ14493 270 aaKnown RBP eCLIP12.1□□□□□ -0.47
PTPN7-207ENST00000468385 SLC25A35Q3KQZ1 300 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 C1orf185Q5T7R7 199 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 TMIGD1Q6UXZ0 262 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 SLCO4C1Q6ZQN7 724 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 FAM47EQ6ZV65 393 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 VN1R5Q7Z5H4 357 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 GOLM1Q8NBJ4 401 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 MORN4Q8NDC4 146 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 TTLQ8NG68 377 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 CCT6BQ92526 530 aa12.1□□□□□ -0.47
PTPN7-207ENST00000468385 DAZLQ92904 295 aaKnown RBP12.1□□□□□ -0.47
PTPN7-207ENST00000468385 GSX1Q9H4S2 264 aaPredicted RBP12.1□□□□□ -0.47
PTPN7-207ENST00000468385 SEMA4BQ9NPR2 832 aaPredicted RBP12.1□□□□□ -0.47
PTPN7-207ENST00000468385 RASSF1Q9NS23 344 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms