RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 C8orf33Q9H7E9 229 aaPredicted RBP8.4□□□□□ -1.07
HPS4-209ENST00000466781 TMEM184CQ9NVA4 438 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 BAZ2AQ9UIF9 1905 aaKnown RBP8.4□□□□□ -1.07
HPS4-209ENST00000466781 EME2A4GXA9 379 aaPredicted RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 CDC123O75794 336 aaPredicted RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 CDH11P55287 796 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 ADAM17P78536 824 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 DAG1Q14118 895 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 NPY5RQ15761 445 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 SNX29P2Q8IUI4 249 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 SPAG16Q8N0X2 631 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 GATSQ8NAP1 163 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 OR4F6Q8NGB9 312 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 COQ8AQ8NI60 647 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 RAB2BQ8WUD1 216 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 NANOS1Q8WY41 292 aaKnown RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 LRRC58Q96CX6 371 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 AP1S3Q96PC3 154 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 ITPAQ9BY32 194 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 FAM120CQ9NX05 1096 aaKnown RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 WDR45Q9Y484 360 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 TRIM64CA6NLI5 447 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 OR5K4A6NMS3 321 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 CAPN5O15484 640 aaPredicted RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 EN2P19622 333 aaPredicted RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 S1PR1P21453 382 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 SLC26A5P58743 744 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 BLMHQ13867 455 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 TSTQ16762 297 aaKnown RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 FAM69BQ5VUD6 431 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 GLT8D1Q68CQ7 371 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 AGTRAPQ6RW13 159 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 SUSD1Q6UWL2 747 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 CPNE8Q86YQ8 564 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 NPAS3Q8IXF0 933 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 NIPA2Q8N8Q9 360 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 GRPEL2Q8TAA5 225 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 THAP3Q8WTV1 239 aaPredicted RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 NSMAFQ92636 917 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 HSPBAP1Q96EW2 488 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 TMEM80Q96HE8 168 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 ALPK1Q96QP1 1244 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 TSSK6Q9BXA6 273 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 KCNK13Q9HB14 408 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 SH2B3Q9UQQ2 575 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 RBMX2Q9Y388 322 aaKnown RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 ANKRD66B4E2M5 251 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 FBP2O00757 339 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 CA3P07451 260 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 JUNDP17535 347 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 EDNRBP24530 442 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 UQCRC1P31930 480 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 MAGEA11P43364 429 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 HSD11B2P80365 405 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 E2F1Q01094 437 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 FGL2Q14314 439 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 ZNF630Q2M218 657 aaPredicted RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 SLC35G1Q2M3R5 365 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 SLC36A3Q495N2 470 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 LY6G5CQ5SRR4 150 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 ZC3H14Q6PJT7 736 aaKnown RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 GPR137CQ8N3F9 429 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 SPRYD4Q8WW59 207 aaPredicted RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 DAZLQ92904 295 aaKnown RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 TMEM203Q969S6 136 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 RAB7BQ96AH8 199 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 PGAM5Q96HS1 289 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 OR51B5Q9H339 312 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 AKTIPQ9H8T0 292 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 CXorf21Q9HAI6 301 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 UCKL1Q9NWZ5 548 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 NUFIP1Q9UHK0 495 aaKnown RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 PET100P0DJ07 73 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 JUPP14923 745 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 UQCRC2P22695 453 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 DPP6P42658 865 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 SCN7AQ01118 1682 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 HERC3Q15034 1050 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 PLEKHS1Q5SXH7 462 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 BBS10Q8TAM1 723 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 PYURFQ96I23 114 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 ZNF641Q96N77 438 aaPredicted RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 PELOQ9BRX2 385 aaKnown RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 DNTTIP1Q9H147 329 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 DENND2DQ9H6A0 471 aaPredicted RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 ZNF701Q9NV72 531 aaPredicted RBP8.39□□□□□ -1.07
HPS4-209ENST00000466781 CACNA1SQ13698 1873 aa8.39□□□□□ -1.07
HPS4-209ENST00000466781 MPPED1O15442 326 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 LPLP06858 475 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 CD3GP09693 182 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 EBLN1P0CF75 366 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 GSTM2P28161 218 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 PEX2P28328 305 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 GABRA3P34903 492 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 OGDHQ02218 1023 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 TMEM115Q12893 351 aaPredicted RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 AIMP2Q13155 320 aaKnown RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 LIN52Q52LA3 116 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 ZNF805Q5CZA5 627 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 GPRC6AQ5T6X5 926 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms