RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 MTIF3Q9H2K0 278 aaKnown RBP4.71□□□□□ -1.66
PTCD3-205ENST00000464541 S100A14Q9HCY8 104 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 THYN1Q9P016 225 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 UMODL1Q5DID0 1318 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 BICDL2A1A5D9 508 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 CCDC162PA2VCL2 907 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 SHISA9B4DS77 424 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 CCSO14618 274 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 GALR3O60755 368 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-205ENST00000464541 GH1P01241 217 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 FOLR2P14207 255 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 KCNJ1P48048 391 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 FKBP1BP68106 108 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 ZFP36L1Q07352 338 aaKnown RBP4.7□□□□□ -1.66
PTCD3-205ENST00000464541 C15orf32Q32M92 178 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 TEX35Q5T0J7 233 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 LRRC38Q5VT99 294 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 NHLRC1Q6VVB1 395 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 HOOK3Q86VS8 718 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 TUSC5Q8IXB3 177 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 KLHDC8AQ8IYD2 350 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 SPAG16Q8N0X2 631 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 SMYD1Q8NB12 490 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 GOT1L1Q8NHS2 421 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-205ENST00000464541 TEKT1Q969V4 418 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 NABP1Q96AH0 204 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 TAAR6Q96RI8 345 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 WDR41Q9HAD4 459 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 UBE2TQ9NPD8 197 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-205ENST00000464541 SH3GLB2Q9NR46 395 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 DNAJC17Q9NVM6 304 aaKnown RBP4.7□□□□□ -1.66
PTCD3-205ENST00000464541 RARRES3Q9UL19 164 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 TMED7Q9Y3B3 224 aa4.7□□□□□ -1.66
PTCD3-205ENST00000464541 TRGV8A0A0C4DH27 118 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 GTPBP10A4D1E9 387 aaKnown RBP4.69□□□□□ -1.66
PTCD3-205ENST00000464541 H0Y626 953 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 ZNF749O43361 778 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 ATP9AO75110 1047 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 SLC16A8O95907 504 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 IGHG1P01857 330 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 CD1DP15813 335 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 TCF7P36402 384 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-205ENST00000464541 LIMK2P53671 638 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 RBBP4Q09028 425 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 FASTKQ14296 549 aaKnown RBP4.69□□□□□ -1.66
PTCD3-205ENST00000464541 SIX1Q15475 284 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-205ENST00000464541 ACKR1Q16570 336 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 POM121L1PQ3SYA9 428 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 SLC25A30Q5SVS4 291 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 PODNL1Q6PEZ8 512 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 CYP4V2Q6ZWL3 525 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-205ENST00000464541 MCM10Q7L590 875 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 TBC1D10CQ8IV04 446 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 FGFRL1Q8N441 504 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 LIPHQ8WWY8 451 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 RFT1Q96AA3 541 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 CCDC28BQ9BUN5 200 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 UTP14AQ9BVJ6 771 aaKnown RBP4.69□□□□□ -1.66
PTCD3-205ENST00000464541 LRRC2Q9BYS8 371 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 SLC39A8Q9C0K1 460 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 ADNPQ9H2P0 1102 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 SP140LQ9H930 580 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 GRPEL1Q9HAV7 217 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 DEPPQ9NTK1 212 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 SEPT10Q9P0V9 454 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 ZNF319Q9P2F9 582 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 RPGRIP1LQ68CZ1 1315 aa4.69□□□□□ -1.66
PTCD3-205ENST00000464541 A0A087X0K7 114 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 A0A1W2PRQ8 180 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 FAM170AA1A519 330 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 ANHXE9PGG2 379 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 SLC33A1O00400 549 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-205ENST00000464541 TXNL1O43396 289 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 HPP00738 406 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 PTMAP06454 111 aaKnown RBP4.68□□□□□ -1.66
PTCD3-205ENST00000464541 NOVP48745 357 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 ACY1Q03154 408 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 SLC34A1Q06495 639 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 MUC21Q5SSG8 566 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 C9orf66Q5T8R8 295 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 Q6ZR54 194 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 LINC00696Q6ZRV3 163 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 OTOAQ7RTW8 1153 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 ANKRD23Q86SG2 305 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 RPAINQ86UA6 219 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 OR1B1Q8NGR6 318 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 CDKN2AIPNLQ96HQ2 116 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 UBAC1Q9BSL1 405 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 CUEDC2Q9H467 287 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 COPS7BQ9H9Q2 264 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-205ENST00000464541 SPATA2Q9UM82 520 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 LIPT1Q9Y234 373 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 ETV7Q9Y603 341 aa4.68□□□□□ -1.66
PTCD3-205ENST00000464541 MAGEB16A2A368 324 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 TRIM49BA6NDI0 452 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 SRRM5B3KS81 715 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 FBP2O00757 339 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 CCR4P51679 360 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 ST8SIA6P61647 398 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms