RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 RUNX2Q13950 521 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 RBBP5Q15291 538 aaKnown RBP16.03■□□□□ 0.16
HMGN1-210ENST00000464078 SLC25A35Q3KQZ1 300 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 RNASEH2BQ5TBB1 312 aaKnown RBP16.03■□□□□ 0.16
HMGN1-210ENST00000464078 RTL6Q6ICC9 239 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 C16orf47Q6ZP98 133 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-210ENST00000464078 RTL4Q6ZR62 310 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 TRILQ7L0X0 811 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.03■□□□□ 0.16
HMGN1-210ENST00000464078 TMEM132CQ8N3T6 1108 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 GOLM1Q8NBJ4 401 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 TMEM52Q8NDY8 209 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 OR8K3Q8NH51 312 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 ANKRD7Q92527 254 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 MS4A6EQ96DS6 147 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 CERS2Q96G23 380 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 FAR2Q96K12 515 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 FAM173AQ9BQD7 235 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 DNAJB12Q9NXW2 375 aaKnown RBP16.03■□□□□ 0.16
HMGN1-210ENST00000464078 IKZF3Q9UKT9 509 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 SLC22A14Q9Y267 594 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 LIPGQ9Y5X9 500 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 A0A088AWK7 358 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 A0A0G2JNJ9 132 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 LRIT2A6NDA9 550 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 GOLGA6L6A8MZA4 724 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 ERI3O43414 337 aaKnown RBP16.02■□□□□ 0.16
HMGN1-210ENST00000464078 B3GALT2O43825 422 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 SUSD5O60279 629 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 WDR1O75083 606 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 ZNF37AP17032 561 aaPredicted RBP16.02■□□□□ 0.16
HMGN1-210ENST00000464078 ZNF10P21506 573 aaPredicted RBP16.02■□□□□ 0.16
HMGN1-210ENST00000464078 HNMTP50135 292 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 HK2P52789 917 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 CCZ1BP86790 482 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 CCZ1P86791 482 aaPredicted RBP16.02■□□□□ 0.16
HMGN1-210ENST00000464078 ADPRMQ3LIE5 342 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 FAM45BPQ6NSW5 357 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 IL20RBQ6UXL0 311 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 HSDL2Q6YN16 418 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 KLHDC8AQ8IYD2 350 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 TMEM251Q8N6I4 163 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 MORN4Q8NDC4 146 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 OR5M9Q8NGP3 310 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 OR14A16Q8NHC5 309 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 FAM45AQ8TCE6 357 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 SGCZQ96LD1 299 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 QRFPRQ96P65 431 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 IL1RL2Q9HB29 575 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 Q9UFV3 132 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 ST6GALNAC2Q9UJ37 374 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 VWA7Q9Y334 891 aa16.02■□□□□ 0.16
HMGN1-210ENST00000464078 EML6Q6ZMW3 1958 aa16.02■□□□□ 0.15
HMGN1-210ENST00000464078 FAM47E-STBD1D6RA91 191 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 CYR61O00622 381 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 FAM155BO75949 473 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 GNAZP19086 355 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 KLK2P20151 261 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 CNR1P21554 472 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 HPDP32754 393 aaPredicted RBP16.01■□□□□ 0.15
HMGN1-210ENST00000464078 PEX19P40855 299 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 MAGEA5P43359 124 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 PGGT1BP53609 377 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 FOXO1Q12778 655 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 RCN2Q14257 317 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 ZNF585AQ6P3V2 769 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 TMIGD1Q6UXZ0 262 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 SLCO4C1Q6ZQN7 724 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 OR2L5Q8NG80 312 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 OR10Q1Q8NGQ4 319 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 DAZLQ92904 295 aaKnown RBP16.01■□□□□ 0.15
HMGN1-210ENST00000464078 SCYL1Q96KG9 808 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 PITHD1Q9GZP4 211 aaPredicted RBP16.01■□□□□ 0.15
HMGN1-210ENST00000464078 LIN28AQ9H9Z2 209 aaKnown RBP16.01■□□□□ 0.15
HMGN1-210ENST00000464078 PLAC1Q9HBJ0 212 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 CCM2LQ9NUG4 571 aaPredicted RBP16.01■□□□□ 0.15
HMGN1-210ENST00000464078 ZNF358Q9NW07 568 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 SLC17A6Q9P2U8 582 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 VTI1BQ9UEU0 232 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 CLCA3PQ9Y6N3 262 aa16.01■□□□□ 0.15
HMGN1-210ENST00000464078 ARHGAP21Q5T5U3 1957 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 A0A0G2JN53 185 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 WWP2O00308 870 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 CLEC3AO75596 197 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 TBX6O95947 436 aaPredicted RBP16■□□□□ 0.15
HMGN1-210ENST00000464078 C1GALT1C1LP0DN25 315 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 SAT1P21673 171 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 ADH7P40394 386 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 SLC6A12P48065 614 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 FNTAP49354 379 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 PPP2R2AP63151 447 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 EFTUD2Q15029 972 aaKnown RBP eCLIP16■□□□□ 0.152e-22■■■■■ 48.1
HMGN1-210ENST00000464078 TEDDM1Q5T9Z0 273 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 ARSKQ6UWY0 536 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 LIX1LQ8IVB5 337 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 FAM47BQ8NA70 645 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 GRK7Q8WTQ7 553 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 PTPMT1Q8WUK0 201 aaPredicted RBP16■□□□□ 0.15
HMGN1-210ENST00000464078 SARAFQ96BY9 339 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 ALPK1Q96QP1 1244 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms