RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 S100BP04271 92 aaPredicted RBP13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 PRF1P14222 555 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 GRNP28799 593 aaKnown RBP13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 TNFRSF8P28908 595 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 PTGER4P35408 488 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 KCNC1P48547 511 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 HNRNPFP52597 415 aaKnown RBP13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 IRF8Q02556 426 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 PCDH1Q08174 1060 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 NAB1Q13506 487 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 NAA30Q147X3 362 aaPredicted RBP13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 ELAVL1Q15717 326 aaKnown RBP13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 RNFT1Q5M7Z0 435 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 LRRC70Q7Z2Q7 622 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 CHERPQ8IWX8 916 aaKnown RBP13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 TMEM132CQ8N3T6 1108 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 TMEM156Q8N614 296 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 CPSF7Q8N684 471 aaKnown RBP13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 TMEM52Q8NDY8 209 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 C7orf57Q8NEG2 295 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 STAG3L4Q8TBR4 150 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 UBE2E3Q969T4 207 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 NCLNQ969V3 563 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 KCNC2Q96PR1 638 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 CD244Q9BZW8 370 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 COPS7BQ9H9Q2 264 aaPredicted RBP13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 NMRAL1Q9HBL8 299 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 LYRM4Q9HD34 91 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 PRDM7Q9NQW5 492 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 ZNF223Q9UK11 482 aaPredicted RBP13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 FBXW2Q9UKT8 454 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 RNF112Q9ULX5 631 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 YARS2Q9Y2Z4 477 aaKnown RBP13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 MEMO1Q9Y316 297 aa13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 UTP11Q9Y3A2 253 aaKnown RBP13.39□□□□□ -0.27
SNRNP40-203ENST00000463988 CCDC189A1A4V9 331 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 ITGA10O75578 1167 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 ABOP16442 354 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 EPORP19235 508 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 CD22P20273 847 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 CERS1P27544 350 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 CRABP2P29373 138 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 SERPINB1P30740 379 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 MEOX1P50221 254 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 PLTPP55058 493 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 CHIT1Q13231 466 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 KBTBD12Q3ZCT8 623 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 TMEM35AQ53FP2 167 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 CCDC91Q7Z6B0 441 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 ISCA2Q86U28 154 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 SULF2Q8IWU5 870 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 MCEMP1Q8IX19 187 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 CTAGE3PQ8IX95 158 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 GPALPP1Q8IXQ4 340 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 EID3Q8N140 333 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 CYP4Z2PQ8N1L4 340 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 FAM47BQ8NA70 645 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 ZFP62Q8NB50 900 aaPredicted RBP13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 MORN4Q8NDC4 146 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 C16orf52Q8NHV5 167 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 PHF10Q8WUB8 498 aaKnown RBP13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 UBTD2Q8WUN7 234 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 DAZLQ92904 295 aaKnown RBP13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 ESAMQ96AP7 390 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 F2RL3Q96RI0 385 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 TBCDQ9BTW9 1192 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 RAB17Q9H0T7 212 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 TIMMDC1Q9NPL8 285 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 NUDT4Q9NZJ9 180 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 KCMF1Q9P0J7 381 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 VTI1BQ9UEU0 232 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 CLCA3PQ9Y6N3 262 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 CSMD1Q96PZ7 3565 aa13.38□□□□□ -0.27
SNRNP40-203ENST00000463988 E9PLN8 166 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 PRRG2O14669 202 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 PEX1O43933 1283 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 CCNT2O60583 730 aaKnown RBP13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 KERAO60938 352 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 SCELO95171 688 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 SLC35E2BP0CK96 405 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 PPP2R1BP30154 601 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 STX2P32856 288 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 MAGEA4P43358 317 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 SSR4P51571 173 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 SERTAD2Q14140 314 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 FBXO48Q5FWF7 155 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 ADNP2Q6IQ32 1131 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 UBE3DQ7Z6J8 389 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 TBC1D1Q86TI0 1168 aaPredicted RBP13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 DOLPP1Q86YN1 238 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 SRRM1Q8IYB3 904 aaKnown RBP13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 LAS2Q8IYD9 372 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 PPM1NQ8N819 430 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 OR14A16Q8NHC5 309 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 FBXO25Q8TCJ0 367 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 ZNF473Q8WTR7 871 aaKnown RBP13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 CSF3RQ99062 836 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 VKORC1Q9BQB6 163 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 MS4A8Q9BY19 250 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 ALOXE3Q9BYJ1 711 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms