RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 CTNSO60931 367 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 MYO1DO94832 1006 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 LTA4HP09960 611 aaKnown RBP19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 EFTUD2Q15029 972 aaKnown RBP eCLIP19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 ELAVL1Q15717 326 aaKnown RBP19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 TMEM35AQ53FP2 167 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 RPTNQ6XPR3 784 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 UBE3DQ7Z6J8 389 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 TBC1D1Q86TI0 1168 aaPredicted RBP19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 CCDC25Q86WR0 208 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 POGLUT1Q8NBL1 392 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 CCDC120Q96HB5 630 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 KCNC2Q96PR1 638 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 TBCDQ9BTW9 1192 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 MS4A8Q9BY19 250 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 ZDHHC18Q9NUE0 388 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 TSC22D4Q9Y3Q8 395 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 A8MUA0 341 aa19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 K7EPI3 171 aa19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 CCNT2O60583 730 aaKnown RBP19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 MTHFD2P13995 350 aa19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 CERS1P27544 350 aa19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 SRSF11Q05519 484 aaKnown RBP19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 SLC13A2Q13183 592 aa19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 SLMAPQ14BN4 828 aa19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 RAPH1Q70E73 1250 aa19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 C17orf53Q8N3J3 647 aaPredicted RBP19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 ZNF808Q8N4W9 903 aaPredicted RBP19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 C7orf57Q8NEG2 295 aa19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 F2RL3Q96RI0 385 aa19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 COPS7BQ9H9Q2 264 aaPredicted RBP19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 ADGRE2Q9UHX3 823 aa19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 ACOT9Q9Y305 439 aa19.16■□□□□ 0.66
PDLIM4-205ENST00000463615 TRBV11-1A0A0K0K1C0 115 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 HMX2A2RU54 273 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 CCL21O00585 134 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 ASNA1O43681 348 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 AGAP20933 346 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 GMPRP36959 345 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 ST13P50502 369 aaKnown RBP19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 CASP6P55212 293 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 CKAP4Q07065 602 aaKnown RBP19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 NAA30Q147X3 362 aaPredicted RBP19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 MAPKAPK3Q16644 382 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 SPPL2CQ8IUH8 684 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 RELL1Q8IUW5 271 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 CENPLQ8N0S6 344 aaPredicted RBP19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 TMEM132CQ8N3T6 1108 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 TMEM125Q96AQ2 219 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 CSF3RQ99062 836 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 PNO1Q9NRX1 252 aaKnown RBP19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 OPTCQ9UBM4 332 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 VTI1BQ9UEU0 232 aa19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 KLF13Q9Y2Y9 288 aaPredicted RBP19.15■□□□□ 0.66
PDLIM4-205ENST00000463615 CRYBG3Q68DQ2 2970 aa19.14■□□□□ 0.66
PDLIM4-205ENST00000463615 A0A087X1B8 175 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 SYCE1LA8MT33 242 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 NPIPA5E9PKD4 350 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 HNRNPRO43390 633 aaKnown RBP19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 KLK8O60259 260 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 ATP5A1P25705 553 aaKnown RBP19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 PPP2R1BP30154 601 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 MSH2P43246 934 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 ARFIP1P53367 373 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 MED27Q6P2C8 311 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 ZNF793Q6ZN11 406 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 BNC2Q6ZN30 1099 aaPredicted RBP19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 CHERPQ8IWX8 916 aaKnown RBP19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 GHDCQ8N2G8 530 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 ACOT4Q8N9L9 421 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 FAM47BQ8NA70 645 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 MORN4Q8NDC4 146 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 OR7G3Q8NG95 312 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 NCLNQ969V3 563 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 NXNL1Q96CM4 212 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 FUT8Q9BYC5 575 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 NPIPA1Q9UND3 350 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 YARS2Q9Y2Z4 477 aaKnown RBP19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 MYO9AB2RTY4 2548 aa19.14■□□□□ 0.65
PDLIM4-205ENST00000463615 TMEM200CA6NKL6 621 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 SUPT3HB4E1H0 165 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 UBXN8O00124 270 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 SUPT3HO75486 399 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 ITGA10O75578 1167 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 ZFAND5O76080 213 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 C2P06681 752 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 EPB42P16452 691 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 ZNF24P17028 368 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 HIST1H1TP22492 207 aaPredicted RBP19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 SERTAD2Q14140 314 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 ACAP2Q15057 778 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 C3AR1Q16581 482 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 FAM83EQ2M2I3 478 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 RNFT1Q5M7Z0 435 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 GRHL2Q6ISB3 625 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 METTL2BQ6P1Q9 378 aaKnown RBP19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 XKRXQ6PP77 449 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 CHSY3Q70JA7 882 aa19.13■□□□□ 0.65
PDLIM4-205ENST00000463615 MRGPRGQ86SM5 289 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms