RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 CPSF6Q16630 551 aaKnown RBP eCLIP12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 ERCC6LQ2NKX8 1250 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 LANCL3Q6ZV70 420 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 LGI4Q8N135 537 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 RBMXL3Q8N7X1 1067 aaKnown RBP12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 ACOT4Q8N9L9 421 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 OR52B6Q8NGF0 335 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 WDR77Q9BQA1 342 aaPredicted RBP12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 PRM3Q9NNZ6 103 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 LYARQ9NX58 379 aaKnown RBP12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 TEKT2Q9UIF3 430 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 CCDC151A5D8V7 595 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 J3QKU1 62 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 CYR61O00622 381 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 COPEO14579 308 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 DNAJB6O75190 326 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 SORBS2O94875 1100 aaKnown RBP12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 TGFB1P01137 390 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 HSD3B1P14060 373 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 HSD3B2P26439 372 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 CERS1P27544 350 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 ARL1P40616 181 aaPredicted RBP12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 UNC50Q53HI1 259 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 PAPD4Q6PIY7 484 aaKnown RBP12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 CYP4X1Q8N118 509 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 TSLPQ969D9 159 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 NSUN5Q96P11 429 aaKnown RBP12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 RBCK1Q9BYM8 510 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 BRF2Q9HAW0 419 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 SEMA4BQ9NPR2 832 aaPredicted RBP12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 PRTFDC1Q9NRG1 225 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 NMRK1Q9NWW6 199 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 AHSPQ9NZD4 102 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 KCMF1Q9P0J7 381 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 ADAM29Q9UKF5 820 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 EMCNQ9ULC0 261 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 CFAP46Q8IYW2 2715 aa12.27□□□□□ -0.45
R3HDM1-213ENST00000463230 SCN2AQ99250 2005 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 SMIM23A6NLE4 172 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 PLIN3O60664 434 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 CDC123O75794 336 aaPredicted RBP12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 ENO1P06733 434 aaKnown RBP12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 PPP2R1BP30154 601 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 RPS13P62277 151 aaKnown RBP12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 DDX39BQ13838 428 aaKnown RBP12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 SERTAD2Q14140 314 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 B3GNTL1Q67FW5 361 aaPredicted RBP12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 TTC19Q6DKK2 380 aaPredicted RBP12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 H3F3CQ6NXT2 135 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 ZNF793Q6ZN11 406 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 Q6ZS92 163 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 CROCCP2Q86T23 111 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 OR4F6Q8NGB9 312 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 TMEM237Q96Q45 408 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 MTERF1Q99551 399 aaKnown RBP12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 OR51B5Q9H339 312 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 ELOVL6Q9H5J4 265 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 DDX31Q9H8H2 851 aaKnown RBP12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 PPIEQ9UNP9 301 aaKnown RBP12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 B3GNT3Q9Y2A9 372 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 CPAMD8Q8IZJ3 1885 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 A0A0G2JN53 185 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 SAGE2PA6NJ88 616 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 KALRNO60229 2985 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 CTNSO60931 367 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 SEC24DO94855 1032 aaPredicted RBP12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 SUPT7LO94864 414 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 KRT6AP02538 564 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 KRT6BP04259 564 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 KRT4P19013 534 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 KRT6CP48668 564 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 SLC26A5P58743 744 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 ASPHQ12797 758 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 LCP2Q13094 533 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 RAPSNQ13702 412 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 BTBD16Q32M84 506 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 SLC6A19Q695T7 634 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 GPRIN3Q6ZVF9 776 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 TRABD2AQ86V40 505 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 PSMF1Q92530 271 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 APOPT1Q96IL0 206 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 MESP1Q9BRJ9 268 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 SENP1Q9P0U3 644 aa12.26□□□□□ -0.45
R3HDM1-213ENST00000463230 FAM227AF5H4B4 570 aa12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 G3V2L1 256 aa12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 MASP2O00187 686 aa12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 PLPP1O14494 284 aa12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 TLX1P31314 330 aaPredicted RBP12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 TAS2R50P59544 299 aa12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 PAGE2Q7Z2X7 111 aa12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 NUDT13Q86X67 352 aa12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 BRIX1Q8TDN6 353 aaKnown RBP12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 ZNF354BQ96LW1 612 aa12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 EPN3Q9H201 632 aa12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 ADAP2Q9NPF8 381 aa12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 NECTIN3Q9NQS3 549 aa12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 V9GYY5 206 aaPredicted RBP12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 ZNF462Q96JM2 2506 aa12.25□□□□□ -0.45
R3HDM1-213ENST00000463230 A0A0A6YYD5 115 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms