RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 SMC6Q96SB8 1091 aa13.84□□□□□ -0.19
NCK1-202ENST00000460960 C1QTNF3Q9BXJ4 246 aa13.84□□□□□ -0.19
NCK1-202ENST00000460960 GSTO2Q9H4Y5 243 aa13.84□□□□□ -0.19
NCK1-202ENST00000460960 KLHL31Q9H511 634 aa13.84□□□□□ -0.19
NCK1-202ENST00000460960 ZNF304Q9HCX3 659 aa13.84□□□□□ -0.19
NCK1-202ENST00000460960 ZNF282Q9UDV7 671 aaPredicted RBP13.84□□□□□ -0.19
NCK1-202ENST00000460960 TMCO1Q9UM00 188 aa13.84□□□□□ -0.19
NCK1-202ENST00000460960 ANGPTL3Q9Y5C1 460 aa13.84□□□□□ -0.19
NCK1-202ENST00000460960 TNPO3Q9Y5L0 923 aaKnown RBP13.84□□□□□ -0.19
NCK1-202ENST00000460960 SCN2AQ99250 2005 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 CSMD2Q7Z408 3487 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 VSTM2BA6NLU5 285 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 FFAR3O14843 346 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 GPR42O15529 346 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 NDUFS4O43181 175 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 FOXS1O43638 330 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 DNAJB6O75190 326 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 RASAL1O95294 804 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 ONECUT2O95948 504 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 CRYABP02511 175 aaKnown RBP13.83□□□□□ -0.2
NCK1-202ENST00000460960 SERPIND1P05546 499 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 ZGLP1P0C6A0 271 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 MYZAPP0CAP1 466 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 PRR35P0CG20 571 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 ESRRAP11474 423 aaPredicted RBP13.83□□□□□ -0.2
NCK1-202ENST00000460960 CPA3P15088 417 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 TAC1P20366 129 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 CXCR2P25025 360 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 MST1P26927 711 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 ALDH3A1P30838 453 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 CASP2P42575 452 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 CA7P43166 264 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 ETV4P43268 484 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 PCDH1Q08174 1060 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 TBCCQ15814 346 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 LETMD1Q6P1Q0 360 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 TMIGD1Q6UXZ0 262 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 ASPGQ86U10 573 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 CCDC63Q8NA47 563 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 SUN3Q8TAQ9 357 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 TRPC4APQ8TEL6 797 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 SLC13A3Q8WWT9 602 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 RERGQ96A58 199 aaPredicted RBP13.83□□□□□ -0.2
NCK1-202ENST00000460960 L3HYPDHQ96EM0 354 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 EHD1Q9H4M9 534 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 TNFRSF12AQ9NP84 129 aa13.83□□□□□ -0.2
NCK1-202ENST00000460960 ARGLU1Q9NWB6 273 aaPredicted RBP13.83□□□□□ -0.2
NCK1-202ENST00000460960 CELSR1Q9NYQ6 3014 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 UBFD1O14562 309 aaKnown RBP13.82□□□□□ -0.2
NCK1-202ENST00000460960 SH3BGRLO75368 114 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 SUPT7LO94864 414 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 CELA2AP08217 269 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 IMPDH1P20839 514 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 FBLP22087 321 aaKnown RBP13.82□□□□□ -0.2
NCK1-202ENST00000460960 HNRNPH1P31943 449 aaKnown RBP13.82□□□□□ -0.2
NCK1-202ENST00000460960 GRK3P35626 688 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 HNF4AP41235 474 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 NAGLUP54802 743 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 MAGOHP61326 146 aaKnown RBP13.82□□□□□ -0.2
NCK1-202ENST00000460960 PMP22Q01453 160 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 CLCQ05315 142 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 TTMPQ5BVD1 217 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 TCHHL1Q5QJ38 904 aaPredicted RBP13.82□□□□□ -0.2
NCK1-202ENST00000460960 GRHL2Q6ISB3 625 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 TMEM214Q6NUQ4 689 aaKnown RBP13.82□□□□□ -0.2
NCK1-202ENST00000460960 NDUFAF7Q7L592 441 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 HDXQ7Z353 690 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 PDSS2Q86YH6 399 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 MYLK4Q86YV6 388 aaPredicted RBP13.82□□□□□ -0.2
NCK1-202ENST00000460960 CNPY4Q8N129 248 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 CCNYL1Q8N7R7 359 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 THAP11Q96EK4 314 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 PKNOX2Q96KN3 472 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 CAPS2Q9BXY5 557 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 TRIM8Q9BZR9 551 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 ACTR8Q9H981 624 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 OXSMQ9NWU1 459 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 ZFP69BQ9UJL9 534 aa13.82□□□□□ -0.2
NCK1-202ENST00000460960 A0A0A6YYC8 382 aaPredicted RBP13.81□□□□□ -0.2
NCK1-202ENST00000460960 A0A0G2JN53 185 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 I3L1I5 382 aaPredicted RBP13.81□□□□□ -0.2
NCK1-202ENST00000460960 H2AFYO75367 372 aaKnown RBP13.81□□□□□ -0.2
NCK1-202ENST00000460960 WDPCPO95876 746 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 ZNF888P0CJ79 500 aaPredicted RBP13.81□□□□□ -0.2
NCK1-202ENST00000460960 PCNAP12004 261 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 COX6A1P12074 109 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 IL1RNP18510 177 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 ARRB2P32121 409 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 SOX11P35716 441 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 AHRP35869 848 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 NEK2P51955 445 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 CCNG1P51959 295 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 EMP2P54851 167 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 CPSF6Q16630 551 aaKnown RBP eCLIP13.81□□□□□ -0.2
NCK1-202ENST00000460960 SYT16Q17RD7 645 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 TOR1AIP1Q5JTV8 583 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 METTL2BQ6P1Q9 378 aaKnown RBP13.81□□□□□ -0.2
NCK1-202ENST00000460960 XKRXQ6PP77 449 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 ZCCHC23Q6ZST2 131 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 LAPTM4BQ86VI4 370 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms