RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 LRRK2Q5S007 2527 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 POLEQ07864 2286 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 ESPL1Q14674 2120 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 ESPNB1AK53 854 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 TGFBR3LH3BV60 316 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 RTCAO00442 366 aaKnown RBP12.49□□□□□ -0.41
COMMD1-206ENST00000458337 PLPP1O14494 284 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 CDK2AP1O14519 115 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 DLX3O60479 287 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 SLU7O95391 586 aaKnown RBP12.49□□□□□ -0.41
COMMD1-206ENST00000458337 TAC1P20366 129 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 IMPDH1P20839 514 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 CERS1P27544 350 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 HSD17B3P37058 310 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 CCNG1P51959 295 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 VSNL1P62760 191 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 HERVK_113P63132 956 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 TLR1Q15399 786 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 TERF2Q15554 542 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 ZRSR2Q15696 482 aaKnown RBP12.49□□□□□ -0.41
COMMD1-206ENST00000458337 GGTA1PQ4G0N0 100 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 B3GNTL1Q67FW5 361 aaPredicted RBP12.49□□□□□ -0.41
COMMD1-206ENST00000458337 RPUSD3Q6P087 351 aaKnown RBP12.49□□□□□ -0.41
COMMD1-206ENST00000458337 GALNT11Q8NCW6 608 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 CATSPER1Q8NEC5 780 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 ARMC2Q8NEN0 867 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 MYRIPQ8NFW9 859 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 ATP6V1E2Q96A05 226 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 SNRNP40Q96DI7 357 aaKnown RBP12.49□□□□□ -0.41
COMMD1-206ENST00000458337 ERVK-6Q9BXR3 956 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 ZNF717Q9BY31 904 aaPredicted RBP12.49□□□□□ -0.41
COMMD1-206ENST00000458337 CLMPQ9H6B4 373 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 COPS7BQ9H9Q2 264 aaPredicted RBP12.49□□□□□ -0.41
COMMD1-206ENST00000458337 PRTFDC1Q9NRG1 225 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 TEKT2Q9UIF3 430 aa12.49□□□□□ -0.41
COMMD1-206ENST00000458337 MRPS33Q9Y291 106 aaKnown RBP12.49□□□□□ -0.41
COMMD1-206ENST00000458337 USP9XQ93008 2570 aaPredicted RBP12.48□□□□□ -0.41
COMMD1-206ENST00000458337 A0A1B0GTL3 188 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 BLACEA4D250 179 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 SYNDIG1LA6NDD5 238 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 SAGE2PA6NJ88 616 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 GOLGA8RI6L899 631 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 PPP6CO00743 305 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 WDPCPO95876 746 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 ATP5F1P24539 256 aaPredicted RBP12.48□□□□□ -0.41
COMMD1-206ENST00000458337 BSGP35613 385 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 TNFSF10P50591 281 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 GPR143P51810 404 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 NEK2P51955 445 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 RPS13P62277 151 aaKnown RBP12.48□□□□□ -0.41
COMMD1-206ENST00000458337 SLAMF1Q13291 335 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 DDX39BQ13838 428 aaKnown RBP12.48□□□□□ -0.41
COMMD1-206ENST00000458337 ZNF169Q14929 603 aaPredicted RBP12.48□□□□□ -0.41
COMMD1-206ENST00000458337 UNC50Q53HI1 259 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 ACER2Q5QJU3 275 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 ZNF678Q5SXM1 525 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 FRG2Q64ET8 278 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 MILR1Q7Z6M3 343 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 MYLK4Q86YV6 388 aaPredicted RBP12.48□□□□□ -0.41
COMMD1-206ENST00000458337 ARMC10Q8N2F6 343 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 ZCCHC7Q8N3Z6 543 aaKnown RBP12.48□□□□□ -0.41
COMMD1-206ENST00000458337 C7orf57Q8NEG2 295 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 OR4F6Q8NGB9 312 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 C19orf60Q96EN9 201 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 ZNF354BQ96LW1 612 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 MAGEB10Q96LZ2 347 aaPredicted RBP12.48□□□□□ -0.41
COMMD1-206ENST00000458337 CDK15Q96Q40 435 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 FRG2BQ96QU4 278 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 CSF3RQ99062 836 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 NPAS2Q99743 824 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 MAPKAP1Q9BPZ7 522 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 CENPKQ9BS16 269 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 ILKAPQ9H0C8 392 aaPredicted RBP12.48□□□□□ -0.41
COMMD1-206ENST00000458337 DDX31Q9H8H2 851 aaKnown RBP12.48□□□□□ -0.41
COMMD1-206ENST00000458337 KCNK13Q9HB14 408 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 PLA2G3Q9NZ20 509 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 LUZP4Q9P127 313 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 VTI1BQ9UEU0 232 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 ZNF225Q9UK10 706 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 EMCNQ9ULC0 261 aa12.48□□□□□ -0.41
COMMD1-206ENST00000458337 DYTNA2CJ06 578 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 CLEC18AA5D8T8 446 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 A8MUI8 341 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 FOXO6A8MYZ6 492 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 SAP18O00422 153 aaKnown RBP12.47□□□□□ -0.41
COMMD1-206ENST00000458337 CDH16O75309 829 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 SH3BGRLO75368 114 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 ETHE1O95571 254 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 OTCP00480 354 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 NUDT17P0C025 328 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 CRHR1P34998 444 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 SSR2P43308 183 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 PRKAA2P54646 552 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 CDH13P55290 713 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 PHEXP78562 749 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 CLCQ05315 142 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 PRR30Q53SZ7 412 aaPredicted RBP12.47□□□□□ -0.41
COMMD1-206ENST00000458337 ABHD17BQ5VST6 288 aa12.47□□□□□ -0.41
COMMD1-206ENST00000458337 MRM1Q6IN84 353 aaKnown RBP12.47□□□□□ -0.41
COMMD1-206ENST00000458337 CLEC18BQ6UXF7 455 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms