RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 FAM151BQ6UXP7 276 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 DPPA2Q7Z7J5 298 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 RBM45Q8IUH3 476 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 ARHGEF19Q8IW93 802 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 THEM5Q8N1Q8 247 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 SYNE4Q8N205 404 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 ZBTB2Q8N680 514 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 METTL25Q8N6Q8 603 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 FAM86B1Q8N7N1 296 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 ATP6V0D2Q8N8Y2 350 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 PAPD5Q8NDF8 572 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 CSNK2A3Q8NEV1 391 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 GPRC5AQ8NFJ5 357 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 OR5D18Q8NGL1 313 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 TCP10LQ8TDR4 215 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 RAB24Q969Q5 203 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 DTD2Q96FN9 168 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 BOD1Q96IK1 185 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 FAM84BQ96KN1 310 aaPredicted RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 ZNF512Q96ME7 567 aaPredicted RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 TEFMQ96QE5 360 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 TAAR6Q96RI8 345 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 GPA33Q99795 319 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 SMOQ99835 787 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 SH2D3AQ9BRG2 576 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 C7orf50Q9BRJ6 194 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 SEC22CQ9BRL7 303 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 WDR83Q9BRX9 315 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 C17orf80Q9BSJ5 609 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 C1orf43Q9BWL3 253 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 PHF7Q9BWX1 381 aaPredicted RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 ROGDIQ9GZN7 287 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 IL22Q9GZX6 179 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 HOXD1Q9GZZ0 328 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 VCXQ9H320 206 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 ZNF768Q9H5H4 540 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 TMEM185BQ9H7F4 350 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 MOV10Q9HCE1 1003 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 SLCO1C1Q9NYB5 712 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 PLEK2Q9NYT0 353 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 KCND2Q9NZV8 630 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 PTGFRNQ9P2B2 879 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 HSFX1Q9UBD0 423 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 ZNF212Q9UDV6 495 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 PADI1Q9ULC6 663 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 NENFQ9UMX5 172 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 ADAMTS5Q9UNA0 930 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 DIMT1Q9UNQ2 313 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 RHBDD3Q9Y3P4 386 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 LTBP1Q14766 1721 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 PIK3C2GO75747 1445 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 TRPM7Q96QT4 1865 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 LOC100509620A0A075B734 347 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 A0A0J9YVX5 310 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 A0A1B0GUH1 482 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 SAC3D1A6NKF1 404 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 MARCH11A6NNE9 402 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 H3BQ06 376 aaPredicted RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 PFDN6O15212 129 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CHADO15335 359 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 EIF3HO15372 352 aaKnown RBP eCLIP5.16□□□□□ -1.58
VPS41-209ENST00000457055 RNMTO43148 476 aaKnown RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 HSPA12AO43301 675 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 LRCH4O75427 683 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 KDM4BO94953 1096 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 ANXA4P09525 319 aaPredicted RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 SAGP10523 405 aaPredicted RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 CD19P15391 556 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CEBPBP17676 345 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 HK1P19367 917 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 DTYMKP23919 212 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 TEAD1P28347 426 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 GSSP48637 474 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 GPR15P49685 360 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 SERPINH1P50454 418 aaKnown RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 RASSF2P50749 326 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 PGDP52209 483 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 NUP107P57740 925 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CXCR4P61073 352 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 ARF6P62330 175 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 RAB11AP62491 216 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 SIM1P81133 766 aaPredicted RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 ACSM1Q08AH1 577 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 BST1Q10588 318 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 MTAPQ13126 283 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 BFSP2Q13515 415 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 EMC2Q15006 297 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 PGM5Q15124 567 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 MAPK11Q15759 364 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 RAB11BQ15907 218 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 ME3Q16798 604 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 AMZ1Q400G9 498 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 LDLRAP1Q5SW96 308 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 BEND3Q5T5X7 828 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 PRAMEF5Q5TYX0 476 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 C1QL3Q5VWW1 255 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 PRAMEF6Q5VXH4 476 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 FAM160B1Q5W0V3 765 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 KRT79Q5XKE5 535 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 WSCD1Q658N2 575 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms