RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 BMPR2Q13873 1038 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 CYP1B1Q16678 543 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 SLC25A35Q3KQZ1 300 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 HSDL2Q6YN16 418 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 B3GNT6Q6ZMB0 384 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 RTL4Q6ZR62 310 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 SCUBE1Q8IWY4 988 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 SHISA5Q8N114 240 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 RASGEF1CQ8N431 466 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 FAM109AQ8N4B1 249 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 MARVELD2Q8N4S9 558 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 NKAPQ8N5F7 415 aaKnown RBP7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 GOLM1Q8NBJ4 401 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 MORN4Q8NDC4 146 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 OR2M7Q8NG81 312 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 OR5L2Q8NGL0 311 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 OR10Q1Q8NGQ4 319 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 OR8K3Q8NH51 312 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 OR14A16Q8NHC5 309 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 NCLNQ969V3 563 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 SARAFQ96BY9 339 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 CERS2Q96G23 380 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 SMIM10Q96HG1 83 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 TSNARE1Q96NA8 513 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 SMC6Q96SB8 1091 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 FOXC2Q99958 501 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 FAM173AQ9BQD7 235 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 ROGDIQ9GZN7 287 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 NT5DC2Q9H857 520 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 ZDHHC11Q9H8X9 412 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 COPS7BQ9H9Q2 264 aaPredicted RBP7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 PPANQ9NQ55 473 aaKnown RBP7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 NECTIN3Q9NQS3 549 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 KCMF1Q9P0J7 381 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 MYOTQ9UBF9 498 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 JRKLQ9Y4A0 524 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 SPACA6W5XKT8 324 aa7.46□□□□□ -1.22
NIF3L1-209ENST00000454952 A0A1B0GVC2 190 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 NPIPA2E9PIF3 369 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 NPIPA3F8WFD2 350 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 PGRMC1O00264 195 aaKnown RBP7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 AQP7O14520 342 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 LCE2BO14633 110 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 ZNHIT1O43257 154 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 DYRK3O43781 588 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 SUSD5O60279 629 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 DNAJB6O75190 326 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 CLEC3AO75596 197 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 OR2J2O76002 312 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 PDE9AO76083 593 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 NADKO95544 446 aaPredicted RBP7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 IGHG3P01860 377 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 AHSGP02765 367 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 P04436 131 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 IFNA16P05015 189 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 F7P08709 466 aaPredicted RBP7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 C1GALT1C1LP0DN25 315 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 CD99P14209 185 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 COX7A2P14406 83 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 GABRA1P14867 456 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 CNR1P21554 472 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 SAT1P21673 171 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 GABRB3P28472 473 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 DNAJA1P31689 397 aaKnown RBP7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 ZFP36L2P47974 494 aaKnown RBP7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 NUP107P57740 925 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 CCZ1BP86790 482 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 CCZ1P86791 482 aaPredicted RBP7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 STX4Q12846 297 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 HYAL2Q12891 473 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 SERTAD2Q14140 314 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 PPP1R7Q15435 360 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 GXYLT1Q4G148 440 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 RBM20Q5T481 1227 aaKnown RBP7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 WLSQ5T9L3 541 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 RNASEH2BQ5TBB1 312 aaKnown RBP7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 TTC27Q6P3X3 843 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 TRIM40Q6P9F5 258 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 OPN5Q6U736 354 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 SBSNQ6UWP8 590 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 TMIGD1Q6UXZ0 262 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 FRA10AC1Q70Z53 315 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 MDGA2Q7Z553 956 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 ADAMTSL2Q86TH1 951 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 KLHDC8AQ8IYD2 350 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 DND1Q8IYX4 353 aaKnown RBP7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 PDIK1LQ8N165 341 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 TCAIMQ8N3R3 496 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 ANKRD53Q8N9V6 530 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 SRFBP1Q8NEF9 429 aaKnown RBP7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 OR52N2Q8NGI0 321 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 VPS39Q96JC1 886 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 SERINC2Q96SA4 455 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 EGFL8Q99944 293 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 TTYH2Q9BSA4 534 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 TTTY12Q9BZ98 90 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 UCK2Q9BZX2 261 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 DEFB127Q9H1M4 99 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 EHD1Q9H4M9 534 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 KLHL31Q9H511 634 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms