RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 PPIBP23284 216 aaKnown RBP10.22□□□□□ -0.77
PKP4-206ENST00000452162 HSD17B2P37059 387 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 DCTP40126 519 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 RABIFP47224 123 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 PHEXP78562 749 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 VAC14Q08AM6 782 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 C16orf72Q14CZ0 275 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 UAP1L1Q3KQV9 507 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 ZNF542PQ5EBM4 170 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 HS3ST5Q8IZT8 346 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 CLEC4FQ8N1N0 589 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 C2orf73Q8N5S3 287 aaPredicted RBP10.22□□□□□ -0.77
PKP4-206ENST00000452162 VPS37AQ8NEZ2 397 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 OR10Q1Q8NGQ4 319 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 OR5K1Q8NHB7 308 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 PNPT1Q8TCS8 783 aaKnown RBP10.22□□□□□ -0.77
PKP4-206ENST00000452162 SDCCAG3Q96C92 435 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 APOOQ9BUR5 198 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 PELI2Q9HAT8 420 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 SMURF2Q9HAU4 748 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 WASH6PQ9NQA3 447 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 SH3BP4Q9P0V3 963 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 SPATA7Q9P0W8 599 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 VPS4AQ9UN37 437 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 CFAP20Q9Y6A4 193 aaKnown RBP10.22□□□□□ -0.77
PKP4-206ENST00000452162 KLHL33A6NCF5 533 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 ENO4A6NNW6 628 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 GBAP04062 536 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 FUCA1P04066 466 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 ABCB1P08183 1280 aaPredicted RBP10.22□□□□□ -0.77
PKP4-206ENST00000452162 KDELR2P33947 212 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 VEZF1Q14119 521 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 FZD2Q14332 565 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 SHBQ15464 509 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 ZIK1Q3SY52 487 aaPredicted RBP10.22□□□□□ -0.77
PKP4-206ENST00000452162 LRRC23Q53EV4 343 aaPredicted RBP10.22□□□□□ -0.77
PKP4-206ENST00000452162 ZDHHC21Q8IVQ6 265 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 KRT78Q8N1N4 520 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 GALNT15Q8N3T1 639 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 TRIML2Q8N7C3 387 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 OR4A15Q8NGL6 344 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 ZFP28Q8NHY6 868 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 FAM174AQ8TBP5 190 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 TBC1D20Q96BZ9 403 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 MBOAT4Q96T53 435 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 ELF4Q99607 663 aaPredicted RBP10.22□□□□□ -0.77
PKP4-206ENST00000452162 RHBGQ9H310 441 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 TRIT1Q9H3H1 467 aaKnown RBP10.22□□□□□ -0.77
PKP4-206ENST00000452162 VNN3Q9NY84 501 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 ZNF282Q9UDV7 671 aaPredicted RBP10.22□□□□□ -0.77
PKP4-206ENST00000452162 TAC3Q9UHF0 121 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 PNMA8BQ9ULN7 279 aaPredicted RBP10.22□□□□□ -0.77
PKP4-206ENST00000452162 CORO2BQ9UQ03 480 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 COMMD3-BMI1R4GMX3 469 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 ARHGEF17Q96PE2 2063 aaPredicted RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 SPTY2D1-AS1A0A0U1RR47 76 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 A0A1W2PPV9 198 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 GNGT2O14610 69 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 SEC24DO94855 1032 aaPredicted RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 ZNF682O95780 498 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 CER1O95813 267 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 TBX6O95947 436 aaPredicted RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 KLK1P06870 262 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 SLC35G4P0C7Q5 338 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 ETS2P15036 469 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 PTX3P26022 381 aaPredicted RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 SHMT2P34897 504 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 CLCNKAP51800 687 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 YPEL5P62699 121 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 MC1RQ01726 317 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 RGNQ15493 299 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 MPEG1Q2M385 716 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.21□□□□□ -0.77
PKP4-206ENST00000452162 ANKRD34AQ69YU3 496 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 DUS1LQ6P1R4 473 aaKnown RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 SPESP1Q6UW49 350 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 CBLL1Q75N03 491 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 EIF3MQ7L2H7 374 aaKnown RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 R3HCC1LQ7Z5L2 792 aaKnown RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 GALNT10Q86SR1 603 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 SLC9B2Q86UD5 537 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 C17orf64Q86WR6 236 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 OR4K1Q8NGD4 311 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 ADAMTS16Q8TE57 1224 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 RBM4BQ9BQ04 359 aaKnown RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 ACAT2Q9BWD1 397 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 RBM4Q9BWF3 364 aaKnown RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 YTHDF1Q9BYJ9 559 aaKnown RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 TOR3AQ9H497 397 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 IL1RAPQ9NPH3 570 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 PAPOLBQ9NRJ5 636 aaKnown RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 PHPT1Q9NRX4 125 aaPredicted RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 ATAD3AQ9NVI7 634 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 DNAAF2Q9NVR5 837 aaKnown RBP10.21□□□□□ -0.77
PKP4-206ENST00000452162 KLF15Q9UIH9 416 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 RPS6KA6Q9UK32 745 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 ACSL5Q9ULC5 683 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 WDR37Q9Y2I8 494 aa10.21□□□□□ -0.77
PKP4-206ENST00000452162 A0A087WXM4 84 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 PRR19A6NJB7 356 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms