RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 CHERPQ8IWX8 916 aaKnown RBP11.53□□□□□ -0.56
MSH5-209ENST00000450148 ZNF595Q8IYB9 648 aa11.53□□□□□ -0.56
MSH5-209ENST00000450148 RNF175Q8N4F7 328 aa11.53□□□□□ -0.56
MSH5-209ENST00000450148 MMGT1Q8N4V1 131 aa11.53□□□□□ -0.56
MSH5-209ENST00000450148 TMEM178AQ8NBL3 297 aa11.53□□□□□ -0.56
MSH5-209ENST00000450148 NOA1Q8NC60 698 aaKnown RBP11.53□□□□□ -0.56
MSH5-209ENST00000450148 ARMC2Q8NEN0 867 aa11.53□□□□□ -0.56
MSH5-209ENST00000450148 OR7G3Q8NG95 312 aa11.53□□□□□ -0.56
MSH5-209ENST00000450148 ADAMTS18Q8TE60 1221 aa11.53□□□□□ -0.56
MSH5-209ENST00000450148 THAP3Q8WTV1 239 aaPredicted RBP11.53□□□□□ -0.56
MSH5-209ENST00000450148 C16orf45Q96MC5 204 aaPredicted RBP11.53□□□□□ -0.56
MSH5-209ENST00000450148 GPR137Q96N19 417 aa11.53□□□□□ -0.56
MSH5-209ENST00000450148 MAPKAP1Q9BPZ7 522 aa11.53□□□□□ -0.56
MSH5-209ENST00000450148 ACSS3Q9H6R3 686 aa11.53□□□□□ -0.56
MSH5-209ENST00000450148 SNX15Q9NRS6 342 aa11.53□□□□□ -0.56
MSH5-209ENST00000450148 PNO1Q9NRX1 252 aaKnown RBP11.53□□□□□ -0.56
MSH5-209ENST00000450148 SEC14L3Q9UDX4 400 aa11.53□□□□□ -0.56
MSH5-209ENST00000450148 A0A087X1B8 175 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 A0A088AWK7 358 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 TRBV11-1A0A0K0K1C0 115 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 CCDC189A1A4V9 331 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 LRRC14BA6NHZ5 514 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 CLDN4O14493 209 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 CTNSO60931 367 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 SLC25A12O75746 678 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 URI1O94763 535 aaPredicted RBP11.52□□□□□ -0.57
MSH5-209ENST00000450148 KLHL2O95198 593 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 S100BP04271 92 aaPredicted RBP11.52□□□□□ -0.57
MSH5-209ENST00000450148 ZNF10P21506 573 aaPredicted RBP11.52□□□□□ -0.57
MSH5-209ENST00000450148 ATP5A1P25705 553 aaKnown RBP11.52□□□□□ -0.57
MSH5-209ENST00000450148 EEF1DP29692 281 aaKnown RBP11.52□□□□□ -0.57
MSH5-209ENST00000450148 HPDP32754 393 aaPredicted RBP11.52□□□□□ -0.57
MSH5-209ENST00000450148 MAGEA12P43365 314 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 CYB561P49447 251 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 HLCSP50747 726 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 CLCN2P51788 898 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 OC90Q02509 493 aaPredicted RBP11.52□□□□□ -0.57
MSH5-209ENST00000450148 SETDB1Q15047 1291 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 WHAMMP3Q1A5X7 153 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 PAGE2BQ5JRK9 111 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 GRHL2Q6ISB3 625 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 MED27Q6P2C8 311 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 CCDC91Q7Z6B0 441 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.52□□□□□ -0.57
MSH5-209ENST00000450148 CLNKQ7Z7G1 428 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 PLD6Q8N2A8 252 aaKnown RBP11.52□□□□□ -0.57
MSH5-209ENST00000450148 ACOT4Q8N9L9 421 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 NCLNQ969V3 563 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 ISL2Q96A47 359 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 MRRFQ96E11 262 aaKnown RBP11.52□□□□□ -0.57
MSH5-209ENST00000450148 VMP1Q96GC9 406 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 KCNC2Q96PR1 638 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 TBCDQ9BTW9 1192 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 DEFB126Q9BYW3 111 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 CDC42EP4Q9H3Q1 356 aaKnown RBP11.52□□□□□ -0.57
MSH5-209ENST00000450148 LYRM4Q9HD34 91 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 ADAP2Q9NPF8 381 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 OPTCQ9UBM4 332 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 VTI1BQ9UEU0 232 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 ZNF835Q9Y2P0 537 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 TSC22D4Q9Y3Q8 395 aa11.52□□□□□ -0.57
MSH5-209ENST00000450148 UNC79Q9P2D8 2635 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 A0A096LPK6 155 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 MYOCOSA0A1B0GUC4 107 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 SH3BGRLO75368 114 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 TGFB1P01137 390 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 HIST1H1TP22492 207 aaPredicted RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 ALDH6A1Q02252 535 aaKnown RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 SLC13A2Q13183 592 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 ACAP2Q15057 778 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 PCBP2Q15366 365 aaKnown RBP eCLIP11.51□□□□□ -0.57
MSH5-209ENST00000450148 ELAVL1Q15717 326 aaKnown RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 HIST2H2ACQ16777 129 aaPredicted RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 TECRLQ5HYJ1 363 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 DEPDC1Q5TB30 811 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 HIST2H2AA3Q6FI13 130 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 C16orf47Q6ZP98 133 aaPredicted RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 Q6ZPB1 254 aaPredicted RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 CPSF7Q8N684 471 aaKnown RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 TEX9Q8N6V9 391 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 HORMAD2Q8N7B1 307 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 SRFBP1Q8NEF9 429 aaKnown RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 PTPMT1Q8WUK0 201 aaPredicted RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 SLC44A1Q8WWI5 657 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 ITLN2Q8WWU7 325 aaPredicted RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 UBE2E3Q969T4 207 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 ANKRD9Q96BM1 317 aaPredicted RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 CCDC120Q96HB5 630 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 ZNF717Q9BY31 904 aaPredicted RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 TSPAN10Q9H1Z9 355 aaPredicted RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 OR51B5Q9H339 312 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 COPS7BQ9H9Q2 264 aaPredicted RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 ZNF358Q9NW07 568 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 MRPS33Q9Y291 106 aaKnown RBP11.51□□□□□ -0.57
MSH5-209ENST00000450148 ZNF407Q9C0G0 2248 aa11.51□□□□□ -0.57
MSH5-209ENST00000450148 DNAJC13O75165 2243 aa11.5□□□□□ -0.57
MSH5-209ENST00000450148 CACNA1CQ13936 2221 aa11.5□□□□□ -0.57
MSH5-209ENST00000450148 TRGV8A0A0C4DH27 118 aa11.5□□□□□ -0.57
MSH5-209ENST00000450148 SYCE1LA8MT33 242 aa11.5□□□□□ -0.57
MSH5-209ENST00000450148 NPIPA5E9PKD4 350 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms