RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 NXPE1Q8N323 547 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 OR13C4Q8NGS5 318 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 MOAP1Q96BY2 351 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 OR4K3Q96R72 315 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 PKP4Q99569 1192 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 C7orf50Q9BRJ6 194 aaKnown RBP13.42□□□□□ -0.26
ITGB4-202ENST00000449880 XYLT2Q9H1B5 865 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 TMEM184CQ9NVA4 438 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 ERVK13-1Q9NX77 482 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 PRKAB1Q9Y478 270 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 IQCF5A8MTL0 148 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 APOC3P02656 99 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 AIMP2Q13155 320 aaKnown RBP13.42□□□□□ -0.26
ITGB4-202ENST00000449880 SF3A2Q15428 464 aaKnown RBP13.42□□□□□ -0.26
ITGB4-202ENST00000449880 PPP2R2DQ66LE6 453 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 TMEM135Q86UB9 458 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 OR56A1Q8NGH5 318 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 SLC22A18Q96BI1 424 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 MED30Q96HR3 178 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 NLE1Q9NVX2 485 aaPredicted RBP13.42□□□□□ -0.26
ITGB4-202ENST00000449880 CACNG4Q9UBN1 327 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 MARF1Q9Y4F3 1742 aaKnown RBP13.41□□□□□ -0.26
ITGB4-202ENST00000449880 EPOP01588 193 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 CD1DP15813 335 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 PDHA2P29803 388 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 MPIP34949 423 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 NKX2-5P52952 324 aaPredicted RBP13.41□□□□□ -0.26
ITGB4-202ENST00000449880 SEC13P55735 322 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 VAMP2P63027 116 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 RASGEF1BQ0VAM2 473 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 TRAM2Q15035 370 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 KCNJ8Q15842 424 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 TMCO2Q7Z6W1 182 aaPredicted RBP13.41□□□□□ -0.26
ITGB4-202ENST00000449880 TCEANCQ8N8B7 351 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 OSER1Q9NX31 292 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 NUFIP1Q9UHK0 495 aaKnown RBP13.41□□□□□ -0.26
ITGB4-202ENST00000449880 PLEKHA6Q9Y2H5 1048 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 STRCP1A6NGW2 1772 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 PAPPAQ13219 1627 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 EEF1E1O43324 174 aaKnown RBP13.41□□□□□ -0.26
ITGB4-202ENST00000449880 AOC2O75106 756 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 CRISP1P54107 249 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 NRLP54845 237 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 FAM129CQ86XR2 697 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 IQCF2Q8IXL9 164 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 SLC7A5P1Q8MH63 180 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 BBS10Q8TAM1 723 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 HCAR2Q8TDS4 363 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 ABCG5Q9H222 651 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 CERS4Q9HA82 394 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 FBRSL1Q9HCM7 1045 aaKnown RBP13.41□□□□□ -0.26
ITGB4-202ENST00000449880 PIGVQ9NUD9 493 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 CLCA3PQ9Y6N3 262 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 NAP1L6A6NFF2 107 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 LYRM1O43325 122 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 HCRTO43612 131 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 BCHEP06276 602 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 FOSL2P15408 326 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 ZNF823P16415 610 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 POU4F2Q12837 409 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 KLHL26Q53HC5 615 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 FAM122CQ6P4D5 195 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 OSTM1Q86WC4 334 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 PEBP4Q96S96 227 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 NT5DC2Q9H857 520 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 PDLIM7Q9NR12 457 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 PCDHB16Q9NRJ7 776 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 MED31Q9Y3C7 131 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 TPST2O60704 377 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 SLC35E2BP0CK96 405 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 HSD3B1P14060 373 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 GADD45AP24522 165 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 HSD3B2P26439 372 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 SLC5A2P31639 672 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 CCKBRP32239 447 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 NCBP2P52298 156 aaKnown RBP eCLIP13.41□□□□□ -0.26
ITGB4-202ENST00000449880 CASP9P55211 416 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 PIGFQ07326 219 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 SLC3A1Q07837 685 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 RCAN2Q14206 197 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 EIF2S3LQ2VIR3 472 aaKnown RBP13.41□□□□□ -0.26
ITGB4-202ENST00000449880 UNC50Q53HI1 259 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 TCEAL6Q6IPX3 200 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 NUP54Q7Z3B4 507 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 WDR53Q7Z5U6 358 aaPredicted RBP13.41□□□□□ -0.26
ITGB4-202ENST00000449880 HS3ST5Q8IZT8 346 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 DBF4BQ8NFT6 615 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 OR2L2Q8NH16 312 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 NDNFQ8TB73 568 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 SHKBP1Q8TBC3 707 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 TCTEX1D2Q8WW35 142 aa13.41□□□□□ -0.26
ITGB4-202ENST00000449880 BORCS7-ASMTA0A0B4J1R7 106 aa13.4□□□□□ -0.26
ITGB4-202ENST00000449880 CDC7O00311 574 aa13.4□□□□□ -0.26
ITGB4-202ENST00000449880 AQP9O43315 295 aa13.4□□□□□ -0.26
ITGB4-202ENST00000449880 ATP5A1P25705 553 aaKnown RBP13.4□□□□□ -0.26
ITGB4-202ENST00000449880 INAVAQ3KP66 663 aa13.4□□□□□ -0.26
ITGB4-202ENST00000449880 PIM3Q86V86 326 aa13.4□□□□□ -0.26
ITGB4-202ENST00000449880 SPARTQ8N0X7 666 aa13.4□□□□□ -0.26
ITGB4-202ENST00000449880 GHDCQ8N2G8 530 aa13.4□□□□□ -0.26
ITGB4-202ENST00000449880 COX18Q8N8Q8 333 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms