RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 KCMF1Q9P0J7 381 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 ADGRE2Q9UHX3 823 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 FBXW2Q9UKT8 454 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 PLAAQ9Y263 795 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 TSC22D4Q9Y3Q8 395 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 CLDN16Q9Y5I7 305 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 TCRBV16S1A1N1A0A5B0 115 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 J3QKU1 62 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 CYR61O00622 381 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 COPEO14579 308 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 PLIN3O60664 434 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 EEDO75530 441 aaKnown RBP13.91□□□□□ -0.18
HDAC4-204ENST00000446876 SORBS2O94875 1100 aaKnown RBP13.91□□□□□ -0.18
HDAC4-204ENST00000446876 SCELO95171 688 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 OTCP00480 354 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 F10P00742 488 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 UQCRHP07919 91 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 MYL2P10916 166 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 CRHR1P34998 444 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 DEKP35659 375 aaKnown RBP13.91□□□□□ -0.18
HDAC4-204ENST00000446876 SOX11P35716 441 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 ST13P50502 369 aaKnown RBP13.91□□□□□ -0.18
HDAC4-204ENST00000446876 PRKAA2P54646 552 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 SLC13A2Q13183 592 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 PLEKHN1Q494U1 663 aaPredicted RBP13.91□□□□□ -0.18
HDAC4-204ENST00000446876 GGTA1PQ4G0N0 100 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 FRG2Q64ET8 278 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 FCRLBQ6BAA4 426 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 PLAG1Q6DJT9 500 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 OR4C11Q6IEV9 310 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 IGFL3Q6UXB1 125 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 ISLR2Q6UXK2 745 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 ZYG11AQ6WRX3 759 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 SLC22A9Q8IVM8 553 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 SCUBE1Q8IWY4 988 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 SRFBP1Q8NEF9 429 aaKnown RBP13.91□□□□□ -0.18
HDAC4-204ENST00000446876 RGMAQ96B86 450 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 FRG2BQ96QU4 278 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 HBEGFQ99075 208 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 LPAR4Q99677 370 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 ZNF717Q9BY31 904 aaPredicted RBP13.91□□□□□ -0.18
HDAC4-204ENST00000446876 ROGDIQ9GZN7 287 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 PLA2G3Q9NZ20 509 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 RAB21Q9UL25 225 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 MMACHCQ9Y4U1 282 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 CNTRLQ7Z7A1 2325 aa13.91□□□□□ -0.18
HDAC4-204ENST00000446876 KLHL41O60662 606 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 PRKRAO75569 313 aaKnown RBP13.9□□□□□ -0.18
HDAC4-204ENST00000446876 IMPDH1P20839 514 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 PTX3P26022 381 aaPredicted RBP13.9□□□□□ -0.18
HDAC4-204ENST00000446876 BSGP35613 385 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 HNRNPH2P55795 449 aaKnown RBP13.9□□□□□ -0.18
HDAC4-204ENST00000446876 SLC26A5P58743 744 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 ID2Q02363 134 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 SLC18A2Q05940 514 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 IFT88Q13099 833 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 SLAMF1Q13291 335 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 MFAP5Q13361 173 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 IGFBP7Q16270 282 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 CRB2Q5IJ48 1285 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 IGFL2Q6UWQ7 119 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 RIPOR1Q6ZS17 1223 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 TRABD2AQ86V40 505 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 HPS6Q86YV9 775 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 CNPY4Q8N129 248 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 KIF2BQ8N4N8 673 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 ZADH2Q8N4Q0 377 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 MREGQ8N565 214 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 EFCAB3Q8N7B9 438 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 CCNYL1Q8N7R7 359 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 CDYL2Q8N8U2 506 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 CCDC63Q8NA47 563 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 ADAMTS18Q8TE60 1221 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 TM9SF4Q92544 642 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 PNPLA2Q96AD5 504 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 L3HYPDHQ96EM0 354 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 CNDP1Q96KN2 507 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 CENPKQ9BS16 269 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 GSTO2Q9H4Y5 243 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 EPS8L2Q9H6S3 715 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 KCNK13Q9HB14 408 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 LYRM4Q9HD34 91 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 PNO1Q9NRX1 252 aaKnown RBP13.9□□□□□ -0.18
HDAC4-204ENST00000446876 TRPS1Q9UHF7 1281 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 LGALS13Q9UHV8 139 aa13.9□□□□□ -0.18
HDAC4-204ENST00000446876 MRPS33Q9Y291 106 aaKnown RBP13.9□□□□□ -0.18
HDAC4-204ENST00000446876 SAGE2PA6NJ88 616 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 TTLL8A6PVC2 850 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 A8MUI8 341 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 FOXE1O00358 373 aaPredicted RBP13.89□□□□□ -0.19
HDAC4-204ENST00000446876 TMPRSS11DO60235 418 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 MAN1A2O60476 641 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 LDB3O75112 727 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 PDYNP01213 254 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 GBAP04062 536 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 ICAM2P13598 275 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 CPN2P22792 545 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 CCT5P48643 541 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 HSD17B7P56937 341 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 ZNF33BQ06732 778 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms