RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 CORO1CQ9ULV4 474 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-210ENST00000445153 YARS2Q9Y2Z4 477 aaKnown RBP13.17□□□□□ -0.3
SMARCAL1-210ENST00000445153 OARD1Q9Y530 152 aa13.17□□□□□ -0.3
SMARCAL1-210ENST00000445153 SAR1BQ9Y6B6 198 aa13.17□□□□□ -0.3
SMARCAL1-210ENST00000445153 ZNF407Q9C0G0 2248 aa13.17□□□□□ -0.3
SMARCAL1-210ENST00000445153 FAM166BA8MTA8 275 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 NPIPA2E9PIF3 369 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 NPIPA3F8WFD2 350 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 WWP2O00308 870 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 TAPBPO15533 448 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 ZFAND5O76080 213 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 WDR47O94967 919 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 SOX3P41225 446 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 PLA2G16P53816 162 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 RAB38P57729 211 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 PPIAP62937 165 aaKnown RBP13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 CDKL1Q00532 357 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 SLC13A2Q13183 592 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 CBLBQ13191 982 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 SLBPQ14493 270 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 TSNQ15631 228 aaKnown RBP13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 ADPRMQ3LIE5 342 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 TMEM211Q6ICI0 200 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 ARHGAP11AQ6P4F7 1023 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 TMIGD1Q6UXZ0 262 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 CAPN12Q6ZSI9 719 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 EID3Q8N140 333 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 SPATA6LQ8N4H0 392 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 OR2M7Q8NG81 312 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 PTPMT1Q8WUK0 201 aaPredicted RBP13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 ASB5Q8WWX0 329 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 NRGNQ92686 78 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 RND1Q92730 232 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 ESAMQ96AP7 390 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 SEC16BQ96JE7 1060 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 FAR2Q96K12 515 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 RASL10BQ96S79 203 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 KRT12Q99456 494 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 NAPGQ99747 312 aaPredicted RBP13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 EGFL8Q99944 293 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 NPLQ9BXD5 320 aaPredicted RBP13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 TP63Q9H3D4 680 aaPredicted RBP13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 TIMMDC1Q9NPL8 285 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 PNPLA3Q9NST1 481 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 MYOTQ9UBF9 498 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 ERVK-11Q9UQG0 969 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 LIPGQ9Y5X9 500 aa13.16□□□□□ -0.3
SMARCAL1-210ENST00000445153 FAM95CA0A1B0GW59 222 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 NCF1BA6NI72 391 aaPredicted RBP13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 NCF1CA8MVU1 366 aaPredicted RBP13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 EFCAB8A8MWE9 144 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 TUBB4AP04350 444 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 NCF1P14598 390 aaPredicted RBP13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 GNAZP19086 355 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 CERS1P27544 350 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 MSX1P28360 303 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 SSTR1P30872 391 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 CHRNB4P30926 498 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 LIM2P55344 173 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 STXBP1P61764 594 aaKnown RBP13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 MGAT5Q09328 741 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 TRADDQ15628 312 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 ABHD17CQ6PCB6 329 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 SYDE1Q6ZW31 735 aaPredicted RBP13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 DMRTC2Q8IXT2 367 aaPredicted RBP13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 NKAPQ8N5F7 415 aaKnown RBP13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 OR5M9Q8NGP3 310 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 CCT6BQ92526 530 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 ANKRD7Q92527 254 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 LRRC39Q96DD0 335 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 TMEM79Q9BSE2 394 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 ZDHHC11Q9H8X9 412 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 CAB39LQ9H9S4 337 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 ADAP2Q9NPF8 381 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 PRDM7Q9NQW5 492 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 GRHL1Q9NZI5 618 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 CTNNAL1Q9UBT7 734 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 MTO1Q9Y2Z2 717 aaKnown RBP13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 SPG11Q96JI7 2443 aa13.15□□□□□ -0.3
SMARCAL1-210ENST00000445153 EML6Q6ZMW3 1958 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 INTS1Q8N201 2190 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 A8MVJ9 347 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 CLDN4O14493 209 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 H2AFYO75367 372 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 GLSO94925 669 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 CELA3AP09093 270 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 CD22P20273 847 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 HNMTP50135 292 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 HK2P52789 917 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 ARL4CP56559 192 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 BMPR2Q13873 1038 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 RTL6Q6ICC9 239 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 UBE3DQ7Z6J8 389 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 LIX1LQ8IVB5 337 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 ZNF595Q8IYB9 648 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 OR2L5Q8NG80 312 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 VPS39Q96JC1 886 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 SCYL1Q96KG9 808 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 F2RL3Q96RI0 385 aa13.14□□□□□ -0.31
SMARCAL1-210ENST00000445153 CCDC77Q9BR77 488 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms