RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TMEM200CA6NKL6 621 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 PSMD12O00232 456 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-203ENST00000444440 B3GALT2O43825 422 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 KLK8O60259 260 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 PRKRAO75569 313 aaKnown RBP10.15□□□□□ -0.78
SF3A1-203ENST00000444440 RASAL1O95294 804 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 DDAH2O95865 285 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 TGFB1P01137 390 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 S100BP04271 92 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-203ENST00000444440 STSP08842 583 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 PCNAP12004 261 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 ATP5A1P25705 553 aaKnown RBP10.15□□□□□ -0.78
SF3A1-203ENST00000444440 GSTM2P28161 218 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 MLF1P58340 268 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 ID2Q02363 134 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 PCDH1Q08174 1060 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 NAA30Q147X3 362 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-203ENST00000444440 SETDB1Q15047 1291 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 INAQ16352 499 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 C4orf17Q53FE4 359 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 RNFT1Q5M7Z0 435 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 ZNF787Q6DD87 383 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 TRIM40Q6P9F5 258 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 RPS27LQ71UM5 84 aaKnown RBP10.15□□□□□ -0.78
SF3A1-203ENST00000444440 TAOK1Q7L7X3 1001 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 FJX1Q86VR8 437 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 RPS19BP1Q86WX3 136 aaKnown RBP10.15□□□□□ -0.78
SF3A1-203ENST00000444440 TEX9Q8N6V9 391 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 LRRN4CLQ8ND94 238 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 OR7G3Q8NG95 312 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 RHEBL1Q8TAI7 183 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 DCAKDQ8WVC6 231 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 SLC44A1Q8WWI5 657 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 ISL2Q96A47 359 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 SEC16BQ96JE7 1060 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 FAR2Q96K12 515 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 C5orf34Q96MH7 638 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 FRMD6Q96NE9 622 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 SERINC2Q96SA4 455 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 OR51B5Q9H339 312 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 LIN28AQ9H9Z2 209 aaKnown RBP10.15□□□□□ -0.78
SF3A1-203ENST00000444440 PNO1Q9NRX1 252 aaKnown RBP10.15□□□□□ -0.78
SF3A1-203ENST00000444440 ABI3Q9P2A4 366 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 OPTCQ9UBM4 332 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 TEKT2Q9UIF3 430 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 MMACHCQ9Y4U1 282 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 HCFC1P51610 2035 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 ITPR2Q14571 2701 aa10.15□□□□□ -0.78
SF3A1-203ENST00000444440 UNC79Q9P2D8 2635 aa10.15□□□□□ -0.79
SF3A1-203ENST00000444440 A0A087WUV0 522 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-203ENST00000444440 TRBV11-1A0A0K0K1C0 115 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 ZG16O60844 167 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 LDB3O75112 727 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 UNC5CO95185 931 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 KLHL2O95198 593 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 ETHE1O95571 254 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 INHBAP08476 426 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 RHOXF2BP0C7M4 288 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 GCAP28676 217 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 PIK3CGP48736 1102 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 SERPINB9P50453 376 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 NR0B1P51843 470 aaKnown RBP10.14□□□□□ -0.79
SF3A1-203ENST00000444440 MTTPP55157 894 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 SLC13A2Q13183 592 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 LAPTM5Q13571 262 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 DDX39BQ13838 428 aaKnown RBP10.14□□□□□ -0.79
SF3A1-203ENST00000444440 ACAP2Q15057 778 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 PFKFB4Q16877 469 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 LGSNQ5TDP6 509 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 GRHL2Q6ISB3 625 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 MED27Q6P2C8 311 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 DGAT2L6Q6ZPD8 337 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 GALNTL5Q7Z4T8 443 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 GOLGA7Q7Z5G4 137 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 ARMC10Q8N2F6 343 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 SLC5A8Q8N695 610 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 ACOT4Q8N9L9 421 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 B3GNT7Q8NFL0 401 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 HUS1BQ8NHY5 278 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 PTPMT1Q8WUK0 201 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-203ENST00000444440 UCN3Q969E3 161 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 NCLNQ969V3 563 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 NSUN5Q96P11 429 aaKnown RBP10.14□□□□□ -0.79
SF3A1-203ENST00000444440 CDK15Q96Q40 435 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 PAFAH2Q99487 392 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 RHOXF2Q9BQY4 288 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 UTP23Q9BRU9 249 aaKnown RBP10.14□□□□□ -0.79
SF3A1-203ENST00000444440 ZNF717Q9BY31 904 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-203ENST00000444440 VPS11Q9H270 941 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 ZBTB26Q9HCK0 441 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 LRFN1Q9P244 771 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 CPSF2Q9P2I0 782 aaKnown RBP10.14□□□□□ -0.79
SF3A1-203ENST00000444440 NFU1Q9UMS0 254 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 PPIEQ9UNP9 301 aaKnown RBP10.14□□□□□ -0.79
SF3A1-203ENST00000444440 PCDHGB6Q9Y5F9 930 aa10.14□□□□□ -0.79
SF3A1-203ENST00000444440 CENPEQ02224 2701 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 TEX15Q9BXT5 2789 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 DCHS2Q6V1P9 2916 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 A0A1B0GTL3 188 aa10.13□□□□□ -0.79
SF3A1-203ENST00000444440 CCDC189A1A4V9 331 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms