RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 SCUBE1Q8IWY4 988 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 LAS2Q8IYD9 372 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 TMEM178AQ8NBL3 297 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 B3GNT7Q8NFL0 401 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 OR7G3Q8NG95 312 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 KIF18AQ8NI77 898 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 ZNF473Q8WTR7 871 aaKnown RBP18.78■□□□□ 0.6
LRCH3-208ENST00000443727 SLC44A1Q8WWI5 657 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 CMTM7Q96FZ5 175 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 CENPKQ9BS16 269 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 MS4A8Q9BY19 250 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 PRDM7Q9NQW5 492 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 LRFN1Q9P244 771 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 DAPP1Q9UN19 280 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 POC1B-GALNT4F8VUJ3 575 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 SAP18O00422 153 aaKnown RBP18.77■□□□□ 0.6
LRCH3-208ENST00000443727 FCHO1O14526 889 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 KRT38O76015 456 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 UNC5CO95185 931 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 TPP2P29144 1249 aaPredicted RBP18.77■□□□□ 0.6
LRCH3-208ENST00000443727 ARL1P40616 181 aaPredicted RBP18.77■□□□□ 0.6
LRCH3-208ENST00000443727 SSR2P43308 183 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 SERPINB9P50453 376 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 CLCN2P51788 898 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 RAP1GDS1P52306 607 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 HNRNPFP52597 415 aaKnown RBP18.77■□□□□ 0.6
LRCH3-208ENST00000443727 SRSF11Q05519 484 aaKnown RBP18.77■□□□□ 0.6
LRCH3-208ENST00000443727 STX4Q12846 297 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 NAA30Q147X3 362 aaPredicted RBP18.77■□□□□ 0.6
LRCH3-208ENST00000443727 TERF2Q15554 542 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 GRHL2Q6ISB3 625 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 ACOT4Q8N9L9 421 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 MDS2Q8NDY4 140 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 TMEM52Q8NDY8 209 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 NFAM1Q8NET5 270 aaPredicted RBP18.77■□□□□ 0.6
LRCH3-208ENST00000443727 UHMK1Q8TAS1 419 aaKnown RBP18.77■□□□□ 0.6
LRCH3-208ENST00000443727 CSF3RQ99062 836 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 PAFAH2Q99487 392 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 CCDC77Q9BR77 488 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 LYRM4Q9HD34 91 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 SEC14L3Q9UDX4 400 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 ADGRE2Q9UHX3 823 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 FBXW2Q9UKT8 454 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 PCDHGB6Q9Y5F9 930 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 TNPO3Q9Y5L0 923 aaKnown RBP18.77■□□□□ 0.6
LRCH3-208ENST00000443727 ICE1Q9Y2F5 2266 aa18.77■□□□□ 0.6
LRCH3-208ENST00000443727 NAV2Q8IVL1 2488 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 SYNDIG1LA6NDD5 238 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 RTCAO00442 366 aaKnown RBP18.76■□□□□ 0.59
LRCH3-208ENST00000443727 CYR61O00622 381 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 CTNSO60931 367 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 ATP5A1P25705 553 aaKnown RBP18.76■□□□□ 0.59
LRCH3-208ENST00000443727 PPP2R1BP30154 601 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 PIK3CGP48736 1102 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 CYB561P49447 251 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 TDGF1P3P51864 188 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 MLF1P58340 268 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 PHEXP78562 749 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 E2F2Q14209 437 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 MAPKAPK3Q16644 382 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 KHDRBS2Q5VWX1 349 aaKnown RBP18.76■□□□□ 0.59
LRCH3-208ENST00000443727 UBE3DQ7Z6J8 389 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 HUS1BQ8NHY5 278 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 THAP3Q8WTV1 239 aaPredicted RBP18.76■□□□□ 0.59
LRCH3-208ENST00000443727 REPS1Q96D71 796 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 VMP1Q96GC9 406 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 SCYL1Q96KG9 808 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 FUT8Q9BYC5 575 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 HES7Q9BYE0 225 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 OR51B5Q9H339 312 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 ADAP2Q9NPF8 381 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 CLCA3PQ9Y6N3 262 aa18.76■□□□□ 0.59
LRCH3-208ENST00000443727 A0A087WUV0 522 aaPredicted RBP18.75■□□□□ 0.59
LRCH3-208ENST00000443727 A0A1B0GUH1 482 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 WIPF3A6NGB9 483 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 CDK2AP1O14519 115 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 SLC25A12O75746 678 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 MLYCDO95822 493 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 RBP1P09455 135 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 HIST1H1TP22492 207 aaPredicted RBP18.75■□□□□ 0.59
LRCH3-208ENST00000443727 MST1P26927 711 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 PCDH1Q08174 1060 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 GTF2H2Q13888 395 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 PCBP2Q15366 365 aaKnown RBP eCLIP18.75■□□□□ 0.59
LRCH3-208ENST00000443727 LIPJQ5W064 366 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 SLC25A25Q6KCM7 469 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 GTF2H2CQ6P1K8 395 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 ZNF793Q6ZN11 406 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 TMEM132CQ8N3T6 1108 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 CEP112Q8N8E3 955 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 FAM98AQ8NCA5 519 aaKnown RBP18.75■□□□□ 0.59
LRCH3-208ENST00000443727 NCLNQ969V3 563 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 TMEM125Q96AQ2 219 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 GPR78Q96P69 363 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 MTERF1Q99551 399 aaKnown RBP18.75■□□□□ 0.59
LRCH3-208ENST00000443727 MAPKAP1Q9BPZ7 522 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 PCDHGA11Q9Y5H2 935 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 DOPEY1Q5JWR5 2465 aa18.75■□□□□ 0.59
LRCH3-208ENST00000443727 MYOCOSA0A1B0GUC4 107 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 LRRC14BA6NHZ5 514 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms