RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 SCIMPQ6UWF3 145 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 CUZD1Q86UP6 607 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 APLFQ8IW19 511 aaPredicted RBP11.61□□□□□ -0.55
USP1-203ENST00000442679 GOLGA6L1Q8N7Z2 621 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 GBP7Q8N8V2 638 aaPredicted RBP11.61□□□□□ -0.55
USP1-203ENST00000442679 TMEM102Q8N9M5 508 aaPredicted RBP11.61□□□□□ -0.55
USP1-203ENST00000442679 FAM47BQ8NA70 645 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 PLPP5Q8NEB5 264 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 OR11G2Q8NGC1 345 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 OR6Y1Q8NGX8 325 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 ADAMTS18Q8TE60 1221 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 PTCHD1Q96NR3 888 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 MAPKAP1Q9BPZ7 522 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 MRPL1Q9BYD6 325 aaKnown RBP11.61□□□□□ -0.55
USP1-203ENST00000442679 ING2Q9H160 280 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 DDX31Q9H8H2 851 aaKnown RBP11.61□□□□□ -0.55
USP1-203ENST00000442679 MLXIPLQ9NP71 852 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 VPS29Q9UBQ0 182 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 FBXL4Q9UKA2 621 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 FBXW2Q9UKT8 454 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 SPACA6W5XKT8 324 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 SEC16AO15027 2179 aa11.61□□□□□ -0.55
USP1-203ENST00000442679 CYR61O00622 381 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 CLDN4O14493 209 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 AZIN1O14977 448 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 KLK1P06870 262 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 CHRNGP07510 517 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 NEFHP12036 1026 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 CHN1P15882 459 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 CCL11P51671 97 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 SLC18A1P54219 525 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 BTG2P78543 158 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 EEF1A2Q05639 463 aaKnown RBP11.6□□□□□ -0.55
USP1-203ENST00000442679 GALNT1Q10472 559 aaPredicted RBP11.6□□□□□ -0.55
USP1-203ENST00000442679 TBL3Q12788 808 aaKnown RBP11.6□□□□□ -0.55
USP1-203ENST00000442679 CHI3L2Q15782 390 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 DCAF10Q5QP82 559 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 CLEC6AQ6EIG7 209 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 CYP20A1Q6UW02 462 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 QSOX2Q6ZRP7 698 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 LANCL3Q6ZV70 420 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 NDUFAF7Q7L592 441 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 PAGE2Q7Z2X7 111 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 ANKRD37Q7Z713 158 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 GPR180Q86V85 440 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 NUDT13Q86X67 352 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 ZNF595Q8IYB9 648 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 METTL4Q8N3J2 472 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 ZCCHC7Q8N3Z6 543 aaKnown RBP11.6□□□□□ -0.55
USP1-203ENST00000442679 TMEM52Q8NDY8 209 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 MGARPQ8TDB4 240 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 WBP1Q96G27 269 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 ATP6V1G3Q96LB4 118 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 UBL7Q96S82 380 aaPredicted RBP11.6□□□□□ -0.55
USP1-203ENST00000442679 SH3GL2Q99962 352 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 ZNF717Q9BY31 904 aaPredicted RBP11.6□□□□□ -0.55
USP1-203ENST00000442679 TRIM55Q9BYV6 548 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 ATP13A2Q9NQ11 1180 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 PRDM9Q9NQV7 894 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 LYARQ9NX58 379 aaKnown RBP11.6□□□□□ -0.55
USP1-203ENST00000442679 NKIRAS1Q9NYS0 192 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 C19orf25Q9UFG5 118 aaPredicted RBP11.6□□□□□ -0.55
USP1-203ENST00000442679 MRPS33Q9Y291 106 aaKnown RBP11.6□□□□□ -0.55
USP1-203ENST00000442679 TRAF6Q9Y4K3 522 aa11.6□□□□□ -0.55
USP1-203ENST00000442679 LOC102723996A0A087X1L8 192 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 UQCRHLA0A096LP55 91 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 IGHV1-45A0A0A0MS14 117 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 A0A0A6YYD5 115 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 NSG1A0A0A6YYJ2 146 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 ARHGAP10A1A4S6 786 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 SERTM1A2A2V5 107 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 A6NL46 340 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 MASP2O00187 686 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 DNAJB5O75953 348 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 SASH3O75995 380 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 HPP00738 406 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 GBAP04062 536 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 SERPINE1P05121 402 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 UQCRHP07919 91 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 FGF4P08620 206 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 FAM58BPP0C7Q3 252 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 FAM87AP0C7U9 286 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 COX6A1P12074 109 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 MAOAP21397 527 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 CPN2P22792 545 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 TLX1P31314 330 aaPredicted RBP11.59□□□□□ -0.55
USP1-203ENST00000442679 HNRNPFP52597 415 aaKnown RBP11.59□□□□□ -0.55
USP1-203ENST00000442679 HSD17B7P56937 341 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 WDR4P57081 412 aaKnown RBP11.59□□□□□ -0.55
USP1-203ENST00000442679 HMGCS1Q01581 520 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 ACTN3Q08043 901 aaPredicted RBP11.59□□□□□ -0.55
USP1-203ENST00000442679 SLC13A2Q13183 592 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 TTMPQ5BVD1 217 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 CCNYL2Q5T2Q4 361 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 PCSK4Q6UW60 755 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 COMMD6Q7Z4G1 85 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 CPEB2Q7Z5Q1 589 aaKnown RBP11.59□□□□□ -0.55
USP1-203ENST00000442679 EFCAB3Q8N7B9 438 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 EXD3Q8N9H8 876 aa11.59□□□□□ -0.55
USP1-203ENST00000442679 CLEC1AQ8NC01 280 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms