RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 NKIRAS1Q9NYS0 192 aa4.56□□□□□ -1.68
PTPN4-206ENST00000441089 ACTR10Q9NZ32 417 aa4.56□□□□□ -1.68
PTPN4-206ENST00000441089 TMEM9Q9P0T7 183 aa4.56□□□□□ -1.68
PTPN4-206ENST00000441089 CPSF2Q9P2I0 782 aaKnown RBP4.56□□□□□ -1.68
PTPN4-206ENST00000441089 KLHL42Q9P2K6 505 aa4.56□□□□□ -1.68
PTPN4-206ENST00000441089 DCDC2Q9UHG0 476 aa4.56□□□□□ -1.68
PTPN4-206ENST00000441089 ADAM21Q9UKJ8 722 aa4.56□□□□□ -1.68
PTPN4-206ENST00000441089 ASB1Q9Y576 335 aa4.56□□□□□ -1.68
PTPN4-206ENST00000441089 MPDZO75970 2070 aa4.56□□□□□ -1.68
PTPN4-206ENST00000441089 DNAJC13O75165 2243 aa4.56□□□□□ -1.68
PTPN4-206ENST00000441089 TRGV8A0A0C4DH27 118 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 PRSS38A1L453 326 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 KRT87PA6NCN2 255 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 MGAT4DA6NG13 374 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 LRRC14BA6NHZ5 514 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 A8MT66 165 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CACNB4O00305 520 aaPredicted RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 BTN3A1O00481 513 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 KLK8O60259 260 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 SHOX2O60902 331 aaPredicted RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 JRKO75564 520 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 SLCO2B1O94956 709 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 FTH1P02794 183 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 ANKRD34CP0C6C1 535 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 MPC1LP0DKB6 136 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 RALBP11234 206 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 ACP5P13686 325 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CPA3P15088 417 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 TAC1P20366 129 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 BGNP21810 368 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 SKIV2L2P42285 1042 aaKnown RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 TSFMP43897 325 aaKnown RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 BDKRB1P46663 353 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CCT5P48643 541 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 SEC24CP53992 1094 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CASP6P55212 293 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 IL2P60568 153 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 ATP6V0D1P61421 351 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 GNGT1P63211 74 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 ADAM8P78325 824 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CSNK1G2P78368 415 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 HSPA14Q0VDF9 509 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 Q0VFX4 171 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 GTF2H3Q13889 308 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 BOP1Q14137 746 aaKnown RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 MYBPC3Q14896 1274 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 ACAP2Q15057 778 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 PCOLCEQ15113 449 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CEBPEQ15744 281 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 PDK4Q16654 411 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 PPP1R3AQ16821 1122 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 C18orf21Q32NC0 220 aaPredicted RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CCDC153Q494R4 210 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CCSMST1Q4G0I0 132 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 FBXO48Q5FWF7 155 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 PLEKHS1Q5SXH7 462 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 AGAP9Q5VTM2 703 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 HHATQ5VTY9 493 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 B3GNTL1Q67FW5 361 aaPredicted RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 GTF2IRD2BQ6EKJ0 949 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CGB2Q6NT52 195 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 UGT3A1Q6NUS8 523 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 FAM180AQ6UWF9 173 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 SBSNQ6UWP8 590 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 ZYG11AQ6WRX3 759 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 ZCCHC23Q6ZST2 131 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 RPS27LQ71UM5 84 aaKnown RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 OTOAQ7RTW8 1153 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CUZD1Q86UP6 607 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 GTF2IRD2Q86UP8 949 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 LRRTM4Q86VH4 590 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 LCA5Q86VQ0 697 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 TMEM200AQ86VY9 491 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 NRROSQ86YC3 692 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 TRAPPC5Q8IUR0 188 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 PHC2Q8IXK0 858 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CNPY4Q8N129 248 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 NKAPQ8N5F7 415 aaKnown RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CCDC63Q8NA47 563 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 ACBD4Q8NC06 268 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 OR2L2Q8NH16 312 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CCL4L1Q8NHW4 92 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 HM13Q8TCT9 377 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 TMEM158Q8WZ71 300 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 EXT2Q93063 718 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 PDLIM5Q96HC4 596 aaKnown RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 RMDN2Q96LZ7 410 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 ZNF317Q96PQ6 595 aaPredicted RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 NRTNQ99748 197 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 SMR3AQ99954 134 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 PAIP2Q9BPZ3 127 aaKnown RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 TREX2Q9BQ50 279 aaPredicted RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 MRPL57Q9BQC6 102 aaKnown RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 GATA5Q9BWX5 397 aaPredicted RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 C20orf27Q9GZN8 174 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 OR52A5Q9H2C5 316 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 MRPL46Q9H2W6 279 aaKnown RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 EPB41L1Q9H4G0 881 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 TFB2MQ9H5Q4 396 aaKnown RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 CCDC134Q9H6E4 229 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms