RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 ERVK-18Q9QC07 812 aa6.15□□□□□ -1.43
BDNF-211ENST00000439476 IKZF2Q9UKS7 526 aa6.15□□□□□ -1.43
BDNF-211ENST00000439476 HSPE1-MOB4S4R3N1 261 aa6.15□□□□□ -1.43
BDNF-211ENST00000439476 GLI3P10071 1580 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 ARL5CA6NH57 179 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 PRRT4C9JH25 899 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 WRBO00258 174 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SLC1A7O00341 560 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ONECUT3O60422 494 aaPredicted RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 ADAM11O75078 769 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 MATN4O95460 622 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 CD63P08962 238 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ZNF30P17039 623 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 EFNA1P20827 205 aaPredicted RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 ITPKAP23677 461 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 EDNRBP24530 442 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 DPP6P42658 865 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ARSDP51689 593 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SMSP52788 366 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SEC13P55735 322 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SELENBP1Q13228 472 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 NOGQ13253 232 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SSPNQ14714 243 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 GRM7Q14831 915 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 KLHL26Q53HC5 615 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 NHSL2Q5HYW2 709 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 RNF111Q6ZNA4 994 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SYVN1Q86TM6 617 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 CARFQ8N187 725 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 C3orf58Q8NDZ4 430 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 OR10G2Q8NGC3 310 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 OR6K2Q8NGY2 324 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 TMEM125Q96AQ2 219 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 LGALS12Q96DT0 336 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 L3HYPDHQ96EM0 354 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ZNF641Q96N77 438 aaPredicted RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 IL12RB2Q99665 862 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 TAPBPLQ9BX59 468 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 POLR2J2Q9GZM3 115 aaKnown RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 ASH2LQ9UBL3 628 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 P2RX2Q9UBL9 471 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 VPS29Q9UBQ0 182 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 MSRAQ9UJ68 235 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 FAM221BA6H8Z2 402 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SOBPA7XYQ1 873 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 MAFKO60675 156 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 MRPS14O60783 128 aaKnown RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 PSIP1O75475 530 aaKnown RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 KRT33AO76009 404 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 CNTN5O94779 1100 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 EBLN1P0CF75 366 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ARSAP15289 507 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 CSF2RAP15509 400 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 EPCAMP16422 314 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 F8A1P23610 371 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ARRB2P32121 409 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 MAGEA11P43364 429 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SLC15A1P46059 708 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 DNASE1L1P49184 302 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ADAM8P78325 824 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 CD47Q08722 323 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SLC13A2Q13183 592 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 PAGE3Q5JUK9 113 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 DNM1P34Q6PK57 102 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 BAIAP2L2Q6UXY1 529 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 CHST9Q7L1S5 443 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 DPPA2Q7Z7J5 298 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ZSWIM9Q86XI8 627 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D15Q8TC07 691 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 DNAJA4Q8WW22 397 aaPredicted RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 FKBP10Q96AY3 582 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 TESCQ96BS2 214 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 MOAP1Q96BY2 351 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 C3orf30Q96M34 536 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SLC30A3Q99726 388 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 CNPPD1Q9BV87 410 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 LGR4Q9BXB1 951 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ACTR6Q9GZN1 396 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 TCF7L1Q9HCS4 588 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 TM9SF3Q9HD45 589 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 MKKSQ9NPJ1 570 aaPredicted RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 PAK1IP1Q9NWT1 392 aaPredicted RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 CFAP97Q9P2B7 532 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 RGS17Q9UGC6 210 aaPredicted RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 ZMIZ1Q9ULJ6 1067 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 F8W036 122 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 TRIM77I1YAP6 450 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ARVCFO00192 962 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SGCEO43556 437 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 VIPP01282 170 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ALPPP05187 535 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 MAPK3P27361 379 aaPredicted RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 DCKP27707 260 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 CSTF2P33240 577 aaKnown RBP eCLIP6.14□□□□□ -1.43
BDNF-211ENST00000439476 MPIP34949 423 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 NUDT6P53370 316 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SP3Q02447 781 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 MXD1Q05195 221 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SOX4Q06945 474 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms