RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 GPX2P18283 190 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 OR1E1P30953 314 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 KIR2DL3P43628 341 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 ZXDBP98169 803 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 HOXC5Q00444 222 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 RUNX1T1Q06455 604 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 DUOXA1Q1HG43 343 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 BTBD16Q32M84 506 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 GLYR1Q49A26 553 aaPredicted RBP8.21□□□□□ -1.1
HPS4-206ENST00000439453 ZNF648Q5T619 568 aaPredicted RBP8.21□□□□□ -1.1
HPS4-206ENST00000439453 LRRC66Q68CR7 880 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 XKRXQ6PP77 449 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 PAMR1Q6UXH9 720 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 CPA6Q8N4T0 437 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 FAM181AQ8N9Y4 354 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 DACT3Q96B18 629 aaPredicted RBP8.21□□□□□ -1.1
HPS4-206ENST00000439453 OPALINQ96PE5 141 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 NTMT1Q9BV86 223 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 UCK2Q9BZX2 261 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 NIPAL2Q9H841 368 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 TMPRSS11EQ9UL52 423 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 SLC6A14Q9UN76 642 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 POFUT2Q9Y2G5 429 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 OARD1Q9Y530 152 aa8.21□□□□□ -1.1
HPS4-206ENST00000439453 FHP07954 510 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 IFI30P13284 250 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 SDC1P18827 310 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 UQCRC1P31930 480 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 TGM4P49221 684 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 SNRPD2P62316 118 aaKnown RBP8.2□□□□□ -1.1
HPS4-206ENST00000439453 PLD1Q13393 1074 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 TEAD2Q15562 447 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 TIGD3Q6B0B8 471 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 ALG1LQ6GMV1 187 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 ZNF621Q6ZSS3 439 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 GLRX5Q86SX6 157 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 GJD3Q8N144 294 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 RPRD1AQ96P16 312 aaPredicted RBP8.2□□□□□ -1.1
HPS4-206ENST00000439453 PANX1Q96RD7 426 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 FAM126AQ9BYI3 521 aaPredicted RBP8.2□□□□□ -1.1
HPS4-206ENST00000439453 ABCG8Q9H221 673 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 P2RY12Q9H244 342 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 NARFLQ9H6Q4 476 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 PDFQ9HBH1 243 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 HHATLQ9HCP6 504 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 MYOFQ9NZM1 2061 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 A0A1W2PRU2 124 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 SHISA7A6NL88 538 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 LEUTXA8MZ59 168 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 GPR39O43194 453 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 SUV39H1O43463 412 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 PDYNP01213 254 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 PRLP01236 227 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 ASGR2P07307 311 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 CYP2A6P11509 494 aaPredicted RBP8.2□□□□□ -1.1
HPS4-206ENST00000439453 ANXA8P13928 327 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 KIR3DL1P43629 444 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 RGRP47804 291 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 CPSF6Q16630 551 aaKnown RBP eCLIP8.2□□□□□ -1.1
HPS4-206ENST00000439453 PTCHD3Q3KNS1 767 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 PARM1Q6UWI2 310 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 MSANTD1Q6ZTZ1 278 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 TSEN54Q7Z6J9 526 aaKnown RBP8.2□□□□□ -1.1
HPS4-206ENST00000439453 GRAMD2AQ8IUY3 354 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 FAM9CQ8IZT9 166 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 UBE2J2Q8N2K1 259 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 LPCAT1Q8NF37 534 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 CHTF18Q8WVB6 975 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 SLC22A12Q96S37 553 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 NIPSNAP1Q9BPW8 284 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 MGME1Q9BQP7 344 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 SLC29A3Q9BZD2 475 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 TMEM245Q9H330 911 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 MAT2BQ9NZL9 334 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 DRGXA6NNA5 263 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 SCAMP3O14828 347 aaKnown RBP8.2□□□□□ -1.1
HPS4-206ENST00000439453 OR2B3O76000 313 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 C1QBP02746 253 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 ZDHHC11BP0C7U3 371 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 EPHB3P54753 998 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 YBEYP58557 167 aaPredicted RBP8.2□□□□□ -1.1
HPS4-206ENST00000439453 CYP4F8P98187 520 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 VEZF1Q14119 521 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 PDZK1Q5T2W1 519 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 SAXO2Q658L1 398 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 PLAG1Q6DJT9 500 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 NADSYN1Q6IA69 706 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 CREB3L2Q70SY1 520 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 SCN4BQ8IWT1 228 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 SYNPOQ8N3V7 929 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 CAMKK1Q8N5S9 505 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 ENKURQ8TC29 256 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 ASB16Q96NS5 453 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 TRPV4Q9HBA0 871 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 ABCB9Q9NP78 766 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 CNOT2Q9NZN8 540 aaKnown RBP8.2□□□□□ -1.1
HPS4-206ENST00000439453 PADI2Q9Y2J8 665 aa8.2□□□□□ -1.1
HPS4-206ENST00000439453 IQCMA0A1B0GVH7 501 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 MAGEB17A8MXT2 336 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 SEC14L5O43304 696 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms