RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ARID2Q68CP9 1835 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 ANK3Q12955 4377 aaKnown RBP2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 RP1P56715 2156 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 INTS1Q8N201 2190 aaKnown RBP2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 MPTX1A8MV57 137 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 RSPH10B2B2RC85 870 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 GAPDHSO14556 408 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 RTL8CO15255 209 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 RSPH10BP0C881 870 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 DUX4L4P0CJ87 422 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 PRKACGP22612 351 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 CAMPP49913 170 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 CYCSP99999 105 aaKnown RBP2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 IKQ13123 557 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 SNTB1Q13884 538 aaKnown RBP2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 ASTE1Q2TB18 679 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 MOGAT2Q3SYC2 334 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 KRTAP5-5Q701N2 237 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 CPLX4Q7Z7G2 160 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 ADGRA1Q86SQ6 560 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 TBC1D1Q86TI0 1168 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 SMAP1Q8IYB5 467 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 MYRIPQ8NFW9 859 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 VANGL1Q8TAA9 524 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 MIPOL1Q8TD10 442 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 SMAP2Q8WU79 429 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 TERF2IPQ9NYB0 399 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 RHCGQ9UBD6 479 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 PCDHGA1Q9Y5H4 931 aa2.3□□□□□ -2.04
HMGB1P18-201ENST00000438801 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 LCTP09848 1927 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 LIPT2A6NK58 231 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 G3V4G9 280 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 LRRTM2O43300 516 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 CXCL14O95715 111 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 ATP1A3P13637 1013 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 PSMA4P25789 261 aaKnown RBP2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 DUSP3P51452 185 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 PDX1P52945 283 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 TMEM50BP56557 158 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 TEFQ10587 303 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 MELKQ14680 651 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 TSTQ16762 297 aaKnown RBP2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 HIGD2BQ4VC39 106 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 C20orf194Q5TEA3 1177 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 SARM1Q6SZW1 724 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 CLEC17AQ6ZS10 378 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 BTN2A1Q7KYR7 527 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 TICAM2Q86XR7 235 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 PDILTQ8N807 584 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 COLGALT1Q8NBJ5 622 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 OR13J1Q8NGT2 312 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 PHLDA1Q8WV24 401 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 POMGNT1Q8WZA1 660 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 ERLEC1Q96DZ1 483 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 NUP85Q9BW27 656 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 PUS3Q9BZE2 481 aaKnown RBP2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 FGF21Q9NSA1 209 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 ZNF701Q9NV72 531 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 TEX10Q9NXF1 929 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 CDH7Q9ULB5 785 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 TP53TG5Q9Y2B4 290 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 USF3Q68DE3 2245 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 VWA8A3KMH1 1905 aa2.29□□□□□ -2.04
HMGB1P18-201ENST00000438801 WNK2Q9Y3S1 2297 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 HYKKA2RU49 373 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 ANKRD61A6NGH8 418 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 A8MZ25 164 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 SSX4O60224 188 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 RSL1D1O76021 490 aaKnown RBP2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 HPRP00739 348 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 IGHV4-31P0DP07 118 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 MYL6BP14649 208 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 DNASE1P24855 282 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 PON1P27169 355 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 SLC6A6P31641 620 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 DNAJC3Q13217 504 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 SQLEQ14534 574 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 DLG2Q15700 870 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 ZNF630Q2M218 657 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 C15orf32Q32M92 178 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 TMEM95Q3KNT9 176 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 SEL1L3Q68CR1 1132 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 APOBEC3HQ6NTF7 200 aaKnown RBP2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 SLC25A47Q6Q0C1 308 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 INTS8Q75QN2 995 aaKnown RBP2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 TEX11Q8IYF3 940 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 TRIML1Q8N9V2 468 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 NUP37Q8NFH4 326 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 OR6S1Q8NH40 331 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 RFFLQ8WZ73 363 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 IRGQQ8WZA9 623 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 ZNF486Q96H40 463 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 OR6C1Q96RD1 312 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 C16orf70Q9BSU1 422 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 CPVLQ9H3G5 476 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 SH2D4AQ9H788 454 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 MAN2C1Q9NTJ4 1040 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 TAS2R14Q9NYV8 317 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 OR6C2Q9NZP2 312 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms