RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 ZGLP1P0C6A0 271 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 CPN2P22792 545 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 TIA1P31483 386 aaKnown RBP eCLIP13.9□□□□□ -0.185e-7■■□□□ 11.7
SKA2-202ENST00000437036 BUD31P41223 144 aaPredicted RBP13.9□□□□□ -0.18
SKA2-202ENST00000437036 GSTM5P46439 218 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 LIM2P55344 173 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 TRA2BP62995 288 aaKnown RBP13.9□□□□□ -0.18
SKA2-202ENST00000437036 MAD2L1Q13257 205 aaPredicted RBP13.9□□□□□ -0.18
SKA2-202ENST00000437036 TUBB8Q3ZCM7 444 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 GALNTL6Q49A17 601 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 GALNT18Q6P9A2 607 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 OR2T11Q8NH01 316 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 PPP1R36Q96LQ0 422 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 CCNL2Q96S94 520 aaPredicted RBP13.9□□□□□ -0.18
SKA2-202ENST00000437036 ZNF717Q9BY31 904 aaPredicted RBP13.9□□□□□ -0.18
SKA2-202ENST00000437036 MEAF6Q9HAF1 191 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 FBXW2Q9UKT8 454 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 TCFL5Q9UL49 500 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 PCDHGA6Q9Y5G7 932 aa13.9□□□□□ -0.18
SKA2-202ENST00000437036 AKAP13Q12802 2813 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 ATP6AP2A0A1C7CYW4 349 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 TERTO14746 1132 aaKnown RBP13.89□□□□□ -0.19
SKA2-202ENST00000437036 EDF1O60869 148 aaKnown RBP13.89□□□□□ -0.19
SKA2-202ENST00000437036 ATP6AP2O75787 350 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 TGDSO95455 350 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 IGHEP01854 428 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 GBAP04062 536 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 CAPNS1P04632 268 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 HEXBP07686 556 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 CYC1P08574 325 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 ANXA4P09525 319 aaPredicted RBP13.89□□□□□ -0.19
SKA2-202ENST00000437036 LIFP15018 202 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 TPP2P29144 1249 aaPredicted RBP13.89□□□□□ -0.19
SKA2-202ENST00000437036 EIF2S3P41091 472 aaKnown RBP13.89□□□□□ -0.19
SKA2-202ENST00000437036 EMP2P54851 167 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 RPL38P63173 70 aaKnown RBP13.89□□□□□ -0.19
SKA2-202ENST00000437036 MC1RQ01726 317 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 SMU1Q2TAY7 513 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 MINDY4Q4G0A6 757 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 VWA2Q5GFL6 755 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 MRM1Q6IN84 353 aaKnown RBP13.89□□□□□ -0.19
SKA2-202ENST00000437036 NOXRED1Q6NXP6 359 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 VASH2Q86V25 355 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 ZC3H7AQ8IWR0 971 aaKnown RBP13.89□□□□□ -0.19
SKA2-202ENST00000437036 PARP9Q8IXQ6 854 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 PRSS58Q8IYP2 241 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 LRRC34Q8IZ02 419 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 FNDC5Q8NAU1 212 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 ZSCAN1Q8NBB4 408 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 C7orf57Q8NEG2 295 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 OR2Y1Q8NGV0 311 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 C3orf30Q96M34 536 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 DCBLD2Q96PD2 775 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 MAPKAP1Q9BPZ7 522 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 CRB3Q9BUF7 120 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 FAIM2Q9BWQ8 316 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 ACTL8Q9H568 366 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 SOX17Q9H6I2 414 aaPredicted RBP13.89□□□□□ -0.19
SKA2-202ENST00000437036 KCMF1Q9P0J7 381 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 EIF3LQ9Y262 564 aaKnown RBP13.89□□□□□ -0.19
SKA2-202ENST00000437036 WBP11Q9Y2W2 641 aaKnown RBP13.89□□□□□ -0.19
SKA2-202ENST00000437036 USH1CQ9Y6N9 552 aa13.89□□□□□ -0.19
SKA2-202ENST00000437036 SCN3AQ9NY46 2000 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 PCDH17O14917 1159 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 POLR3GO15318 223 aaPredicted RBP13.88□□□□□ -0.19
SKA2-202ENST00000437036 TMPRSS11DO60235 418 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 B4GALT2O60909 372 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 DNAJB6O75190 326 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 JUNP05412 331 aaKnown RBP13.88□□□□□ -0.19
SKA2-202ENST00000437036 TROVE2P10155 538 aaKnown RBP eCLIP13.88□□□□□ -0.19
SKA2-202ENST00000437036 NR2F6P10588 404 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 ACPPP15309 386 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 KLC1Q07866 573 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 RFTN2Q52LD8 501 aaPredicted RBP13.88□□□□□ -0.19
SKA2-202ENST00000437036 C6orf136Q5SQH8 315 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 ACAD11Q709F0 780 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 MED25Q71SY5 747 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 PROSER1Q86XN7 944 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 ZNF595Q8IYB9 648 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 FAM47BQ8NA70 645 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 METTL21AQ8WXB1 218 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 VPS50Q96JG6 964 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 SLC45A3Q96JT2 553 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 SPSB2Q99619 263 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 SIKE1Q9BRV8 207 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 EBPLQ9BY08 206 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 RBCK1Q9BYM8 510 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 AKTIPQ9H8T0 292 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 SEMA3GQ9NS98 782 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 C3orf18Q9UK00 162 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 MKL2Q9ULH7 1088 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 RAXQ9Y2V3 346 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 MMACHCQ9Y4U1 282 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 POLR3HQ9Y535 204 aaPredicted RBP13.88□□□□□ -0.19
SKA2-202ENST00000437036 ASB4Q9Y574 426 aa13.88□□□□□ -0.19
SKA2-202ENST00000437036 SYNDIG1LA6NDD5 238 aa13.87□□□□□ -0.19
SKA2-202ENST00000437036 ZNF891A8MT65 544 aaPredicted RBP13.87□□□□□ -0.19
SKA2-202ENST00000437036 FAM227AF5H4B4 570 aa13.87□□□□□ -0.19
SKA2-202ENST00000437036 CYR61O00622 381 aa13.87□□□□□ -0.19
SKA2-202ENST00000437036 PROM1O43490 865 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms