RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 TPP2P29144 1249 aaPredicted RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 IL12AP29459 219 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ADSLP30566 484 aaPredicted RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ZFP36L2P47974 494 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ACADVLP49748 655 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 SEPHS1P49903 392 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PLA2G16P53816 162 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 NME5P56597 212 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 VSX2P58304 361 aaPredicted RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 UFM1P61960 85 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 SUMO1P63165 101 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 HSD11B2P80365 405 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ACSM2AQ08AH3 577 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 MAD2L1Q13257 205 aaPredicted RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 SQLEQ14534 574 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 KCNAB1Q14722 419 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 KRT72Q14CN4 511 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 CLPPQ16740 277 aaPredicted RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 GSTA3Q16772 222 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 HKDC1Q2TB90 917 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PRTGQ2VWP7 1150 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 DEFB110Q30KQ9 67 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 AASDHQ4L235 1098 aaPredicted RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PDCD4Q53EL6 469 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 SPIN4Q56A73 249 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 STPG1Q5TH74 334 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ACSM2BQ68CK6 577 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 FDX2Q6P4F2 183 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 GALNT18Q6P9A2 607 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ABHD17CQ6PCB6 329 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PAOXQ6QHF9 649 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 CYP20A1Q6UW02 462 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ASCL5Q7RTU5 278 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ARHGAP22Q7Z5H3 698 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PIP4P1Q86T03 277 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ZNF227Q86WZ6 799 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 KMT5CQ86Y97 462 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 FUNDC1Q8IVP5 155 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 MIER2Q8N344 545 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 D2HGDHQ8N465 521 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 LIX1Q8N485 282 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ARHGEF39Q8N4T4 335 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 CSNK1A1LQ8N752 337 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 AMER3Q8N944 861 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 OR4D9Q8NGE8 314 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 OR9I1Q8NGQ6 314 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 UTP15Q8TED0 518 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 RGMAQ96B86 450 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 SMIM10Q96HG1 83 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 EGLN2Q96KS0 407 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 TEX37Q96LM6 180 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ZNF285Q96NJ3 590 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 TEFMQ96QE5 360 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 EBPLQ9BY08 206 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 REXO4Q9GZR2 422 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ZNF768Q9H5H4 540 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 DDX31Q9H8H2 851 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PDE7BQ9NP56 450 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 SLC52A3Q9NQ40 469 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PRDM7Q9NQW5 492 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ENAMQ9NRM1 1142 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 STARD5Q9NSY2 213 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ARL8BQ9NVJ2 186 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 BAIAP2L1Q9UHR4 511 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PLCL2Q9UPR0 1127 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 MAPRE3Q9UPY8 281 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 EXO1Q9UQ84 846 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 EIF3LQ9Y262 564 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 RUVBL1Q9Y265 456 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 MRPS2Q9Y399 296 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 TMED5Q9Y3A6 229 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 POLR3HQ9Y535 204 aaPredicted RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ZDBF2Q9HCK1 2354 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PIKFYVEQ9Y2I7 2098 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 A0A0A6YYD5 115 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 A0A0G2JN53 185 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 C9JVG2 144 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 H3BMH7 237 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 SLC22A2O15244 555 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 ERI3O43414 337 aaKnown RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 TMPRSS11DO60235 418 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 PCDH7O60245 1069 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 FOXD2O60548 495 aaPredicted RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 SRPX2O60687 465 aaPredicted RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 DNAJB6O75190 326 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 MYO1DO94832 1006 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 MED26O95402 600 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 CBX6O95503 412 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 CAPNS1P04632 268 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 EIF2S1P05198 315 aaKnown RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 ANXA4P09525 319 aaPredicted RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 ZNF888P0CJ79 500 aaPredicted RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 THRAP10827 490 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 PRPS2P11908 318 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 FOLR1P15328 257 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 HOXB4P17483 251 aaPredicted RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 TIA1P31483 386 aaKnown RBP eCLIP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms