RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 TSLPQ969D9 159 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 SERPINI1Q99574 410 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 TUBB6Q9BUF5 446 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 IQCGQ9H095 443 aaKnown RBP17.27■□□□□ 0.36
HLA-F-220ENST00000434407 ZNF552Q9H707 407 aaPredicted RBP17.27■□□□□ 0.36
HLA-F-220ENST00000434407 DDX31Q9H8H2 851 aaKnown RBP17.27■□□□□ 0.36
HLA-F-220ENST00000434407 BRF2Q9HAW0 419 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 PRDM9Q9NQV7 894 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 RIC8BQ9NVN3 520 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 GPR83Q9NYM4 423 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 SLC17A7Q9P2U7 560 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 C19orf25Q9UFG5 118 aaPredicted RBP17.27■□□□□ 0.36
HLA-F-220ENST00000434407 SNX6Q9UNH7 406 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 CLDN16Q9Y5I7 305 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 NBASA2RRP1 2371 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 A6NL46 340 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 EIF4E1BA6NMX2 242 aaKnown RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 SAP18O00422 153 aaKnown RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 UBFD1O14562 309 aaKnown RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 CTIFO43310 598 aaKnown RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 SPAG7O75391 227 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 ESRRBO95718 433 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 ENO1P06733 434 aaKnown RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 SSR2P43308 183 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 HNRNPFP52597 415 aaKnown RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 HSD17B7P56937 341 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 BTG2P78543 158 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 RCN2Q14257 317 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 NSDHLQ15738 373 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 CEP85LQ5SZL2 805 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 VWA5B1Q5TIE3 1220 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 TTC19Q6DKK2 380 aaPredicted RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 MRM1Q6IN84 353 aaKnown RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 C10orf107Q8IVU9 208 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 ZNF595Q8IYB9 648 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 CCNYL1Q8N7R7 359 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 CCDC63Q8NA47 563 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 TMEM52Q8NDY8 209 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 AGAP11Q8TF27 550 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 MTFMTQ96DP5 389 aaKnown RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 PGM2Q96G03 612 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 PTCHD1Q96NR3 888 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 FAM111AQ96PZ2 611 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 MAPKAP1Q9BPZ7 522 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 SORBS1Q9BX66 1292 aaKnown RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 ELOVL6Q9H5J4 265 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 ZNF160Q9HCG1 818 aa17.26■□□□□ 0.35
HLA-F-220ENST00000434407 SSU72Q9NP77 194 aaKnown RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 ZNF71Q9NQZ8 489 aaPredicted RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 FARSBQ9NSD9 589 aaKnown RBP17.26■□□□□ 0.35
HLA-F-220ENST00000434407 CPAMD8Q8IZJ3 1885 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 A0A0A6YYD5 115 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 TCRBV16S1A1N1A0A5B0 115 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 H3BQF6 201 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 MANBAO00462 879 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 KLHL41O60662 606 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 TRIM13O60858 407 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 PDYNP01213 254 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 PRR35P0CG20 571 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 NR1D1P20393 614 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 ETV4P43268 484 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 PGDP52209 483 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 RAP1GDS1P52306 607 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 ZNF33BQ06732 778 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 FAM219BQ5XKK7 198 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 RIPOR1Q6ZS17 1223 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 ASB18Q6ZVZ8 466 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 EXOC3L1Q86VI1 746 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 PARP9Q8IXQ6 854 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 CDYL2Q8N8U2 506 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 CSF3RQ99062 836 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 LHPPQ9H008 270 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 NECTIN3Q9NQS3 549 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 C5AR2Q9P296 337 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 ZNF451Q9Y4E5 1061 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 ACTL7BQ9Y614 415 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 CROCCQ5TZA2 2017 aa17.25■□□□□ 0.35
HLA-F-220ENST00000434407 SPENQ96T58 3664 aaKnown RBP17.24■□□□□ 0.35
HLA-F-220ENST00000434407 IGHV3-20A0A0C4DH32 117 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 SERTM1A2A2V5 107 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 BLACEA4D250 179 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 TGFBR3LH3BV60 316 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 EEDO75530 441 aaKnown RBP17.24■□□□□ 0.35
HLA-F-220ENST00000434407 KRT6AP02538 564 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 KRT6BP04259 564 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 SERPINA7P05543 415 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 ICAM2P13598 275 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 HSD3B1P14060 373 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 MAOAP21397 527 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 ITGA3P26006 1051 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 HSD3B2P26439 372 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 ALDH3A1P30838 453 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 KRT6CP48668 564 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 SLAMF1Q13291 335 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 SFT2D3Q587I9 215 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 PLAG1Q6DJT9 500 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 HPS6Q86YV9 775 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 KBTBD2Q8IY47 623 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 METTL4Q8N3J2 472 aa17.24■□□□□ 0.35
HLA-F-220ENST00000434407 METTL6Q8TCB7 284 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms