RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TEAD4Q15561 434 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 ZNF542PQ5EBM4 170 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 SYT13Q7L8C5 426 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 TRIM73Q86UV7 250 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 PAQR7Q86WK9 346 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 NFKBIDQ8NI38 313 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 PATE1Q8WXA2 126 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 OR5P2Q8WZ92 322 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 RMND5BQ96G75 393 aaPredicted RBP18.6■□□□□ 0.57
VRK2-205ENST00000432057 SARGQ9BW04 601 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 EPS8L2Q9H6S3 715 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 CD320Q9NPF0 282 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 IL1RAPQ9NPH3 570 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 SNX7Q9UNH6 387 aa18.6■□□□□ 0.57
VRK2-205ENST00000432057 H3BNH8 94 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 PRKRAO75569 313 aaKnown RBP18.59■□□□□ 0.57
VRK2-205ENST00000432057 DIRAS1O95057 198 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 KRT75O95678 551 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 TNFP01375 233 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 ALBP02768 609 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 CELA2BP08218 269 aaPredicted RBP18.59■□□□□ 0.57
VRK2-205ENST00000432057 GSTM2P28161 218 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 MANFP55145 182 aaKnown RBP18.59■□□□□ 0.57
VRK2-205ENST00000432057 TRA2BP62995 288 aaKnown RBP18.59■□□□□ 0.57
VRK2-205ENST00000432057 PPP2R2BQ00005 443 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 HSPB3Q12988 150 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 SCARB2Q14108 478 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 LIN52Q52LA3 116 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 TRIM40Q6P9F5 258 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 OR8K5Q8NH50 307 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 FLVCR1-AS1Q8TAF5 88 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 OSBPL10Q9BXB5 764 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 NLNQ9BYT8 704 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 ASPSCR1Q9BZE9 553 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 TPSD1Q9BZJ3 242 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 RAD21L1Q9H4I0 556 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 C1GALT1Q9NS00 363 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 WSB2Q9NYS7 404 aaPredicted RBP18.59■□□□□ 0.57
VRK2-205ENST00000432057 APOBEC3BQ9UH17 382 aaKnown RBP18.59■□□□□ 0.57
VRK2-205ENST00000432057 MYRFQ9Y2G1 1151 aa18.59■□□□□ 0.57
VRK2-205ENST00000432057 TOR1BO14657 336 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 FKBP9O95302 570 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 H6PDO95479 791 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 CLPTM1O96005 669 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 OPN1SWP03999 348 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 PCBP4P57723 403 aaKnown RBP18.58■□□□□ 0.57
VRK2-205ENST00000432057 EIF2B5Q13144 721 aaKnown RBP18.58■□□□□ 0.57
VRK2-205ENST00000432057 GPR18Q14330 331 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 GAS6Q14393 721 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 SMAD2Q15796 467 aaKnown RBP18.58■□□□□ 0.57
VRK2-205ENST00000432057 TJAP1Q5JTD0 557 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 ABHD17CQ6PCB6 329 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 TRIM48Q8IWZ4 208 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 ZNF687Q8N1G0 1237 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 FAM160A2Q8N612 972 aaPredicted RBP18.58■□□□□ 0.57
VRK2-205ENST00000432057 RLN3Q8WXF3 142 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 LMAN1LQ9HAT1 526 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 PRDM7Q9NQW5 492 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 USE1Q9NZ43 259 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 SLCO1B1Q9Y6L6 691 aa18.58■□□□□ 0.57
VRK2-205ENST00000432057 TMEM229AB2RXF0 380 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 ZW10O43264 779 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 SEC24DO94855 1032 aaPredicted RBP18.58■□□□□ 0.56
VRK2-205ENST00000432057 FRKP42685 505 aaPredicted RBP18.58■□□□□ 0.56
VRK2-205ENST00000432057 PRIM2P49643 509 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 CDK9P50750 372 aaKnown RBP18.58■□□□□ 0.56
VRK2-205ENST00000432057 MYBPC3Q14896 1274 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 NDUFAF5Q5TEU4 345 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 OR2T5Q6IEZ7 315 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 USP51Q70EK9 711 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 SFTPA2Q8IWL1 248 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 NATD1Q8N6N6 113 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 TSTD1Q8NFU3 115 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 OR2L5Q8NG80 312 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 OR2T29Q8NH02 315 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 OR10G6Q8NH81 332 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 GPBAR1Q8TDU6 330 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 ZNF764Q96H86 408 aaPredicted RBP18.58■□□□□ 0.56
VRK2-205ENST00000432057 FCRL4Q96PJ5 515 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 MYCBPQ99417 103 aaPredicted RBP18.58■□□□□ 0.56
VRK2-205ENST00000432057 FAM192AQ9GZU8 254 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 TMEM38AQ9H6F2 299 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 TM9SF3Q9HD45 589 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 SIRT3Q9NTG7 399 aaPredicted RBP18.58■□□□□ 0.56
VRK2-205ENST00000432057 ADPRHL2Q9NX46 363 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 DMTF1Q9Y222 760 aa18.58■□□□□ 0.56
VRK2-205ENST00000432057 CEP192Q8TEP8 1941 aa18.57■□□□□ 0.56
VRK2-205ENST00000432057 CHURC1-FNTBB4DL54 471 aa18.57■□□□□ 0.56
VRK2-205ENST00000432057 SUV39H1O43463 412 aa18.57■□□□□ 0.56
VRK2-205ENST00000432057 TFAP2AP05549 437 aa18.57■□□□□ 0.56
VRK2-205ENST00000432057 THEGLP0DJG4 465 aa18.57■□□□□ 0.56
VRK2-205ENST00000432057 UGT2B7P16662 529 aa18.57■□□□□ 0.56
VRK2-205ENST00000432057 DDX5P17844 614 aaKnown RBP18.57■□□□□ 0.56
VRK2-205ENST00000432057 HIST1H1TP22492 207 aaPredicted RBP18.57■□□□□ 0.56
VRK2-205ENST00000432057 PRKACGP22612 351 aa18.57■□□□□ 0.56
VRK2-205ENST00000432057 CERS1P27544 350 aa18.57■□□□□ 0.56
VRK2-205ENST00000432057 CD6P30203 668 aa18.57■□□□□ 0.56
VRK2-205ENST00000432057 RAB8AP61006 207 aa18.57■□□□□ 0.56
VRK2-205ENST00000432057 EEF1A2Q05639 463 aaKnown RBP18.57■□□□□ 0.56
VRK2-205ENST00000432057 RBBP4Q09028 425 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms