RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ZNF317Q96PQ6 595 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-207ENST00000429896 F2RL3Q96RI0 385 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 RASSF1Q9NS23 344 aa12.39□□□□□ -0.43
PTCH1-207ENST00000429896 WBP11Q9Y2W2 641 aaKnown RBP12.39□□□□□ -0.43
PTCH1-207ENST00000429896 SLC22A2O15244 555 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 ENTPD5O75356 428 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 JUNP05412 331 aaKnown RBP12.38□□□□□ -0.43
PTCH1-207ENST00000429896 RHBDF1Q96CC6 855 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 ZIM2Q9NZV7 527 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 SAMD4AQ9UPU9 718 aaKnown RBP12.38□□□□□ -0.43
PTCH1-207ENST00000429896 DLGAP4Q9Y2H0 992 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 CITO14578 2027 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 H7C0S8 307 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 ECDO95905 644 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-207ENST00000429896 JAZF1Q86VZ6 243 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 WSB2Q9NYS7 404 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-207ENST00000429896 PRPF19Q9UMS4 504 aaKnown RBP12.38□□□□□ -0.43
PTCH1-207ENST00000429896 OR4D2P58180 307 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 ID2Q02363 134 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 PEX5LQ8IYB4 626 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 ROPN1LQ96C74 230 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 CCDC182A6NF36 153 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 ETS2P15036 469 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 MYL9P24844 172 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 RYKP34925 604 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 ITGA1P56199 1179 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 EMX2Q04743 252 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 SLAMF1Q13291 335 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTCH1-207ENST00000429896 POC5Q8NA72 575 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 CADM4Q8NFZ8 388 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 OR2L5Q8NG80 312 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 TSEN15Q8WW01 171 aaKnown RBP12.38□□□□□ -0.43
PTCH1-207ENST00000429896 RASSF5Q8WWW0 418 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 COQ10AQ96MF6 247 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 S1PR5Q9H228 398 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 Q9N2J8 555 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 TFECO14948 347 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-207ENST00000429896 FOXD2O60548 495 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-207ENST00000429896 STARP49675 285 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 LRRC69Q6ZNQ3 347 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 TICAM1Q8IUC6 712 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 ZNF527Q8NB42 609 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 OR56A1Q8NGH5 318 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 OR8D2Q9GZM6 311 aa12.38□□□□□ -0.43
PTCH1-207ENST00000429896 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-207ENST00000429896 SAGP10523 405 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-207ENST00000429896 GRK6P43250 576 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 E2F1Q01094 437 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 OR4F3Q6IEY1 312 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 OR1E3Q8WZA6 343 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 PELOQ9BRX2 385 aaKnown RBP12.37□□□□□ -0.43
PTCH1-207ENST00000429896 SLC35A5Q9BS91 424 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 SRPK3Q9UPE1 567 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 LRRC37A2A6NM11 1700 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 EFCAB7A8K855 629 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 TMCC2O75069 709 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 KRT36O76013 467 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 RLN1P04808 185 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 CATSPEREQ5SY80 951 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 OR2L8Q8NGY9 312 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 DHRS1Q96LJ7 313 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 GABRG3Q99928 467 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 C1QTNF2Q9BXJ5 285 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 TBL1XR1Q9BZK7 514 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 TMEM9BQ9NQ34 198 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 CCR10P46092 362 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 CRISP3P54108 245 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 ZNF267Q14586 743 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-207ENST00000429896 PCBP2Q15366 365 aaKnown RBP eCLIP12.37□□□□□ -0.43
PTCH1-207ENST00000429896 C14orf28Q4W4Y0 310 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 GRHL2Q6ISB3 625 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 TNFAIP8L2Q6P589 184 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-207ENST00000429896 CHCHD4Q8N4Q1 142 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 FAM47BQ8NA70 645 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 FAM13CQ8NE31 585 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 HUS1BQ8NHY5 278 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 TPK1Q9H3S4 243 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 GLOD5A6NK44 160 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 K7ESM1 405 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 FHP07954 510 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 FGF3P11487 239 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-207ENST00000429896 NDUFA5Q16718 116 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 SLC30A6Q6NXT4 461 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 TMPRSS9Q7Z410 1059 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 SLC30A8Q8IWU4 369 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 ETFBKMTQ8IXQ9 262 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 UBE2J2Q8N2K1 259 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 AGBL5Q8NDL9 886 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 TMEM125Q96AQ2 219 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 MRGPRX3Q96LB0 322 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 EDEM2Q9BV94 578 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 PISDQ9UG56 409 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 ADAMTS6Q9UKP5 1117 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 MAU2Q9Y6X3 613 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 ELOVL7A1L3X0 281 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 DECR1Q16698 335 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 NANOGNBQ7Z5D8 188 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 MCATQ8IVS2 390 aaKnown RBP12.37□□□□□ -0.43
PTCH1-207ENST00000429896 SLC34A3Q8N130 599 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms