RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 PHF12Q96QT6 1004 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 F2RL3Q96RI0 385 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 SERINC2Q96SA4 455 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 PITHD1Q9GZP4 211 aaPredicted RBP15.92■□□□□ 0.14
TRIM39-209ENST00000428728 EHD1Q9H4M9 534 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 CHST11Q9NPF2 352 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 GRHL1Q9NZI5 618 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 DNAJC13O75165 2243 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 PHF3Q92576 2039 aaKnown RBP15.92■□□□□ 0.14
TRIM39-209ENST00000428728 CDC40O60508 579 aaKnown RBP eCLIP15.91■□□□□ 0.14
TRIM39-209ENST00000428728 SH3BGRLO75368 114 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 FAM155BO75949 473 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 IFNA16P05015 189 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 GGT5P36269 586 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 GPX6P59796 221 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 RAB10P61026 200 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 CBLBQ13191 982 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 SLMAPQ14BN4 828 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 ABHD17CQ6PCB6 329 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 C16orf47Q6ZP98 133 aaPredicted RBP15.91■□□□□ 0.14
TRIM39-209ENST00000428728 C3orf62Q6ZUJ4 267 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 GDF7Q7Z4P5 450 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 MDGA2Q7Z553 956 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 FGD2Q7Z6J4 655 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 CMC1Q7Z7K0 106 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 ZNF595Q8IYB9 648 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 PPM1NQ8N819 430 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 POGLUT1Q8NBL1 392 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 SPATA4Q8NEY3 305 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 ANP32BQ92688 251 aaKnown RBP15.91■□□□□ 0.14
TRIM39-209ENST00000428728 SEC16BQ96JE7 1060 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 EFCAB11Q9BUY7 163 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 LIN28AQ9H9Z2 209 aaKnown RBP15.91■□□□□ 0.14
TRIM39-209ENST00000428728 ZNF490Q9ULM2 529 aaPredicted RBP15.91■□□□□ 0.14
TRIM39-209ENST00000428728 DAPP1Q9UN19 280 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 ERVK-11Q9UQG0 969 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 ASB1Q9Y576 335 aa15.91■□□□□ 0.14
TRIM39-209ENST00000428728 ABCA12Q86UK0 2595 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 SUPT3HB4E1H0 165 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 KLRC4-KLRK1H3BQV0 150 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 PRRG2O14669 202 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 PEX1O43933 1283 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 HS6ST1O60243 411 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 SUPT3HO75486 399 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 EPORP19235 508 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 MSH2P43246 934 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 SSR4P51571 173 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 IRF8Q02556 426 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 TGM3Q08188 693 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 CHIT1Q13231 466 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 ELAVL1Q15717 326 aaKnown RBP15.9■□□□□ 0.14
TRIM39-209ENST00000428728 ZKSCAN8Q15776 578 aaPredicted RBP15.9■□□□□ 0.14
TRIM39-209ENST00000428728 KBTBD12Q3ZCT8 623 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 CDKL4Q5MAI5 379 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 RAPH1Q70E73 1250 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 LRRC70Q7Z2Q7 622 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 MAATS1Q7Z4T9 603 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 DOLPP1Q86YN1 238 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 KIAA1191Q96A73 305 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 WDR34Q96EX3 536 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 ALG9Q9H6U8 611 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 KCMF1Q9P0J7 381 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 PTBP2Q9UKA9 531 aaKnown RBP15.9■□□□□ 0.14
TRIM39-209ENST00000428728 PPIEQ9UNP9 301 aaKnown RBP15.9■□□□□ 0.14
TRIM39-209ENST00000428728 CLCA3PQ9Y6N3 262 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 HCFC1P51610 2035 aa15.9■□□□□ 0.14
TRIM39-209ENST00000428728 LRBAP50851 2863 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 A8MVJ9 347 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 C19orf84I3L1E1 186 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 RTCAO00442 366 aaKnown RBP15.89■□□□□ 0.13
TRIM39-209ENST00000428728 CYR61O00622 381 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 LDB3O75112 727 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 OR2J2O76002 312 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 ZFAND5O76080 213 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 CLDN14O95500 239 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 C1QAP02745 245 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 TPOP07202 933 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 PCNAP12004 261 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 TFEBP19484 476 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 AGAP20933 346 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 SPRP35270 261 aaPredicted RBP15.89■□□□□ 0.13
TRIM39-209ENST00000428728 PTGER4P35408 488 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 GPR143P51810 404 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 PLTPP55058 493 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 STX4Q12846 297 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 LAPTM5Q13571 262 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 BMPR2Q13873 1038 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 RCN2Q14257 317 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 EFTUD2Q15029 972 aaKnown RBP eCLIP15.89■□□□□ 0.13
TRIM39-209ENST00000428728 PAGE2BQ5JRK9 111 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 ZNF793Q6ZN11 406 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 CD163Q86VB7 1156 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 TMEM132CQ8N3T6 1108 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 ASB15Q8WXK1 588 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 MTFMTQ96DP5 389 aaKnown RBP15.89■□□□□ 0.13
TRIM39-209ENST00000428728 UBXN10Q96LJ8 280 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 MS4A8Q9BY19 250 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 TIMMDC1Q9NPL8 285 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 HPF1Q9NWY4 346 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 NUDT4Q9NZJ9 180 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms