RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 BTBD17A6NE02 478 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 MEN1O00255 615 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 CLOCKO15516 846 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 C1GALT1C1LP0DN25 315 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 PRPS1L1P21108 318 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 PMS2P3Q13401 168 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 INAQ16352 499 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 PPM1JQ5JR12 505 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 FRRS1Q6ZNA5 592 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 ECHDC3Q96DC8 303 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 DTD2Q96FN9 168 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 PPM1MQ96MI6 270 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 FAM192AQ9GZU8 254 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 TM9SF3Q9HD45 589 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 ING3Q9NXR8 418 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 P2RX2Q9UBL9 471 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 PPT2Q9UMR5 302 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 DLGAP4Q9Y2H0 992 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 RTTNQ86VV8 2226 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 SPAARA0A1B0GVQ0 90 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 TRIM24O15164 1050 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 TNFSF14O43557 240 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 DPM1O60762 260 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 BCAS2O75934 225 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 F10P00742 488 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 UNGP13051 313 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 EPHA3P29320 983 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 EIF1AXP47813 144 aaKnown RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 STC1P52823 247 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 CACNA2D1P54289 1103 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 RPS13P62277 151 aaKnown RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 IFI35P80217 286 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 SLAMF1Q13291 335 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 OASLQ15646 514 aaKnown RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 CLPPQ16740 277 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 SMARCD3Q6STE5 483 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 DPPA4Q7L190 304 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 C6orf120Q7Z4R8 191 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 SCD5Q86SK9 330 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 C19orf60Q96EN9 201 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 ZNF71Q9NQZ8 489 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 GSTK1Q9Y2Q3 226 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 PCDHGA8Q9Y5G5 932 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 CREBBPQ92793 2442 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 SRPX2O60687 465 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 IL2RAP01589 272 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 GGT2P36268 569 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 OMPP47874 163 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 OR1D4P47884 311 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 ENTPD1P49961 510 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 CLRN1P58418 232 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 PITX1P78337 314 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 SF3A2Q15428 464 aaKnown RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 TMEM207Q6UWW9 146 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 CEP97Q8IW35 865 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 CCDC116Q8IYX3 515 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 WBP1Q96G27 269 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 TCTN2Q96GX1 697 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 TSGA13Q96PP4 275 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 CDRT15Q96T59 188 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 TIMM29Q9BSF4 260 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 UBAP1Q9NZ09 502 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 ARMCX1Q9P291 453 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 ATXN7L1Q9ULK2 861 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 PCDHGA1Q9Y5H4 931 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 C2orf92A0A1B0GVN3 265 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 H3BML4 177 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 CCRL2O00421 344 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 VILLO15195 856 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 HSPA12AO43301 675 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 GBAP04062 536 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 TDGF1P13385 188 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 CYP4B1P13584 511 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 ZNF20P17024 532 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 GDF5P43026 501 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 SLC15A1P46059 708 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 PCBP4P57723 403 aaKnown RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 OR1D5P58170 312 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 DMPKQ09013 629 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 MALLQ13021 153 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 ZNF77Q15935 545 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 AGAP7PQ5VUJ5 663 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 SPESP1Q6UW49 350 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 ARHGAP36Q6ZRI8 547 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 ZNF687Q8N1G0 1237 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 IL17RCQ8NAC3 791 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 KDF1Q8NAX2 398 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 SETD6Q8TBK2 473 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 EEF1AKMT1Q8WVE0 214 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 PTERQ96BW5 349 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 BIRC7Q96CA5 298 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 AGAP4Q96P64 663 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 SLC22A12Q96S37 553 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 OLFM1Q99784 485 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 ALOXE3Q9BYJ1 711 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 SPHK1Q9NYA1 384 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 SAMD4AQ9UPU9 718 aaKnown RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 R3HDM2Q9Y2K5 976 aaKnown RBP6.92□□□□□ -1.3
CNOT4-206ENST00000428680 ATG2AQ2TAZ0 1938 aa6.92□□□□□ -1.3
CNOT4-206ENST00000428680 WDR81Q562E7 1941 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms