RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 TIMMDC1Q9NPL8 285 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 HPF1Q9NWY4 346 aa15.37■□□□□ 0.05
VARS-216ENST00000428445 YARS2Q9Y2Z4 477 aaKnown RBP15.37■□□□□ 0.05
VARS-216ENST00000428445 ZNF469Q96JG9 3925 aaPredicted RBP15.37■□□□□ 0.05
VARS-216ENST00000428445 PRRC2AP48634 2157 aaKnown RBP15.36■□□□□ 0.05
VARS-216ENST00000428445 MTORP42345 2549 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 FANCGO15287 622 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 ZFAND5O76080 213 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 TUBB4AP04350 444 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 IFNA16P05015 189 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 CELA3AP09093 270 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 ZNF37AP17032 561 aaPredicted RBP15.36■□□□□ 0.05
VARS-216ENST00000428445 MSX1P28360 303 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 RAB38P57729 211 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 ID2Q02363 134 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 TSNQ15631 228 aaKnown RBP15.36■□□□□ 0.05
VARS-216ENST00000428445 ZNF585AQ6P3V2 769 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 TMEM200AQ86VY9 491 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 DMRTC2Q8IXT2 367 aaPredicted RBP15.36■□□□□ 0.05
VARS-216ENST00000428445 SLC35F6Q8N357 371 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 OR5M3Q8NGP4 307 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 OR10Q1Q8NGQ4 319 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 ASB5Q8WWX0 329 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 ASB15Q8WXK1 588 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 GAL3ST3Q96A11 431 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 CCDC77Q9BR77 488 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 TTTY12Q9BZ98 90 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 PPIEQ9UNP9 301 aaKnown RBP15.36■□□□□ 0.05
VARS-216ENST00000428445 NF1P21359 2839 aa15.36■□□□□ 0.05
VARS-216ENST00000428445 NCKAP5O14513 1909 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 CYR61O00622 381 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 H2AFYO75367 372 aaKnown RBP15.35■□□□□ 0.05
VARS-216ENST00000428445 CERS1P27544 350 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 ART1P52961 327 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 LIM2P55344 173 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 TAS2R39P59534 338 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 STXBP1P61764 594 aaKnown RBP15.35■□□□□ 0.05
VARS-216ENST00000428445 FRG1Q14331 258 aaKnown RBP15.35■□□□□ 0.05
VARS-216ENST00000428445 TMIGD1Q6UXZ0 262 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 LIX1LQ8IVB5 337 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 PDIK1LQ8N165 341 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 DOK4Q8TEW6 326 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 PTPMT1Q8WUK0 201 aaPredicted RBP15.35■□□□□ 0.05
VARS-216ENST00000428445 RHBDF1Q96CC6 855 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 SCYL1Q96KG9 808 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 RASL10BQ96S79 203 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 ZNF559Q9BR84 538 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 ALOXE3Q9BYJ1 711 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 SEMA4BQ9NPR2 832 aaPredicted RBP15.35■□□□□ 0.05
VARS-216ENST00000428445 MYOTQ9UBF9 498 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 ZNF490Q9ULM2 529 aaPredicted RBP15.35■□□□□ 0.05
VARS-216ENST00000428445 OARD1Q9Y530 152 aa15.35■□□□□ 0.05
VARS-216ENST00000428445 FAM95CA0A1B0GW59 222 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 CLDN4O14493 209 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 TAPBPO15533 448 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 B3GALT2O43825 422 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 LDB3O75112 727 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 SH3BGRLO75368 114 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 MAGEA5P43359 124 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 SLC6A12P48065 614 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 DNASE1L1P49184 302 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 HK2P52789 917 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 HSD17B7P56937 341 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 RTL6Q6ICC9 239 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 SYDE1Q6ZW31 735 aaPredicted RBP15.34■□□□□ 0.05
VARS-216ENST00000428445 ZC3HC1Q86WB0 502 aaKnown RBP15.34■□□□□ 0.05
VARS-216ENST00000428445 TMEM251Q8N6I4 163 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 CAPZA3Q96KX2 299 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 RUNDC3BQ96NL0 473 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 F2RL3Q96RI0 385 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 CNPPD1Q9BV87 410 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 NPLQ9BXD5 320 aaPredicted RBP15.34■□□□□ 0.05
VARS-216ENST00000428445 OR8D2Q9GZM6 311 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 REXO4Q9GZR2 422 aaKnown RBP15.34■□□□□ 0.05
VARS-216ENST00000428445 ZDHHC11Q9H8X9 412 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 ADAP2Q9NPF8 381 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 CTNNAL1Q9UBT7 734 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 TEX264Q9Y6I9 313 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 AKAP6Q13023 2319 aa15.34■□□□□ 0.05
VARS-216ENST00000428445 ATP6AP2A0A1C7CYW4 349 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 SYNDIG1LA6NDD5 238 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 ATP6AP2O75787 350 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 GLSO94925 669 aaPredicted RBP15.33■□□□□ 0.04
VARS-216ENST00000428445 NADKO95544 446 aaPredicted RBP15.33■□□□□ 0.04
VARS-216ENST00000428445 HOXD4P09016 255 aaPredicted RBP15.33■□□□□ 0.04
VARS-216ENST00000428445 GLI4P10075 376 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 GNAZP19086 355 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 TNNI3P19429 210 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 CNR1P21554 472 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 GMPRP36959 345 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 HNMTP50135 292 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 DLX5P56178 289 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 CDKL1Q00532 357 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 MYBPHQ13203 477 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 FASTKD3Q14CZ7 662 aaKnown RBP15.33■□□□□ 0.04
VARS-216ENST00000428445 MORF4L2Q15014 288 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 TERF2Q15554 542 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 STEAP4Q687X5 459 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 NKAPQ8N5F7 415 aaKnown RBP15.33■□□□□ 0.04
VARS-216ENST00000428445 SMC6Q96SB8 1091 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms