RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 TTC19Q6DKK2 380 aaPredicted RBP19.35■□□□□ 0.69
HSPG2-205ENST00000427897 GOLGA7Q7Z5G4 137 aa19.35■□□□□ 0.69
HSPG2-205ENST00000427897 CLNKQ7Z7G1 428 aa19.35■□□□□ 0.69
HSPG2-205ENST00000427897 DCAKDQ8WVC6 231 aa19.35■□□□□ 0.69
HSPG2-205ENST00000427897 C5orf34Q96MH7 638 aa19.35■□□□□ 0.69
HSPG2-205ENST00000427897 LYRM4Q9HD34 91 aa19.35■□□□□ 0.69
HSPG2-205ENST00000427897 ZNF358Q9NW07 568 aa19.35■□□□□ 0.69
HSPG2-205ENST00000427897 CPAMD8Q8IZJ3 1885 aa19.35■□□□□ 0.69
HSPG2-205ENST00000427897 LRRC14BA6NHZ5 514 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 GABRR3A8MPY1 467 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 RTCAO00442 366 aaKnown RBP19.34■□□□□ 0.69
HSPG2-205ENST00000427897 FCHO1O14526 889 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 SIX3O95343 332 aaPredicted RBP19.34■□□□□ 0.69
HSPG2-205ENST00000427897 CPN2P22792 545 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 ATP5A1P25705 553 aaKnown RBP19.34■□□□□ 0.69
HSPG2-205ENST00000427897 PTX3P26022 381 aaPredicted RBP19.34■□□□□ 0.69
HSPG2-205ENST00000427897 CLCN2P51788 898 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 CCNG1P51959 295 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 SRSF1Q07955 248 aaKnown RBP eCLIP19.34■□□□□ 0.69
HSPG2-205ENST00000427897 DEPDC1Q5TB30 811 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 OR4C11Q6IEV9 310 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 METTL2BQ6P1Q9 378 aaKnown RBP19.34■□□□□ 0.69
HSPG2-205ENST00000427897 TMEM132CQ8N3T6 1108 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 KIF2BQ8N4N8 673 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 ACOT4Q8N9L9 421 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 FAM98AQ8NCA5 519 aaKnown RBP19.34■□□□□ 0.69
HSPG2-205ENST00000427897 HUS1BQ8NHY5 278 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 ELP5Q8TE02 316 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 SSC4DQ8WTU2 575 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 MTBPQ96DY7 904 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 GPR78Q96P69 363 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 MTERF1Q99551 399 aaKnown RBP19.34■□□□□ 0.69
HSPG2-205ENST00000427897 OR51B5Q9H339 312 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 KLHL1Q9NR64 748 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 XPR1Q9UBH6 696 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 FBXW2Q9UKT8 454 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 CLCA3PQ9Y6N3 262 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 SHANK1Q9Y566 2161 aa19.34■□□□□ 0.69
HSPG2-205ENST00000427897 IGKV3D-11A0A0A0MRZ8 115 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 CLEC18AA5D8T8 446 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 KLK8O60259 260 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 UGDHO60701 494 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 CTNSO60931 367 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 CLDN9O95484 217 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 TBX6O95947 436 aaPredicted RBP19.33■□□□□ 0.68
HSPG2-205ENST00000427897 ABHD2P08910 425 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 HIST1H1TP22492 207 aaPredicted RBP19.33■□□□□ 0.68
HSPG2-205ENST00000427897 TLX1P31314 330 aaPredicted RBP19.33■□□□□ 0.68
HSPG2-205ENST00000427897 CD96P40200 585 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 PIK3CBP42338 1070 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 ST13P50502 369 aaKnown RBP19.33■□□□□ 0.68
HSPG2-205ENST00000427897 PCDH1Q08174 1060 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 SLAMF1Q13291 335 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 TUBA3CQ13748 450 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 E2F2Q14209 437 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 OR1C1Q15619 314 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 TUBA3EQ6PEY2 450 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 CLEC18BQ6UXF7 455 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 LGI4Q8N135 537 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 CLEC18CQ8NCF0 446 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 C7orf57Q8NEG2 295 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 B3GNT7Q8NFL0 401 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 DNAJB8Q8NHS0 232 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 BARD1Q99728 777 aaKnown RBP19.33■□□□□ 0.68
HSPG2-205ENST00000427897 MRPL57Q9BQC6 102 aaKnown RBP19.33■□□□□ 0.68
HSPG2-205ENST00000427897 ALOXE3Q9BYJ1 711 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 NOL11Q9H8H0 719 aaKnown RBP19.33■□□□□ 0.68
HSPG2-205ENST00000427897 ANKZF1Q9H8Y5 726 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 ADAP2Q9NPF8 381 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 LRFN1Q9P244 771 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 SLC5A6Q9Y289 635 aa19.33■□□□□ 0.68
HSPG2-205ENST00000427897 TRBV11-1A0A0K0K1C0 115 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 IQANK1A0A1B0GTG1 560 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 RIPK2O43353 540 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 SEMA7AO75326 666 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 RPS13P62277 151 aaKnown RBP19.32■□□□□ 0.68
HSPG2-205ENST00000427897 SCUBE1Q8IWY4 988 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 RNF175Q8N4F7 328 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 TMEM178AQ8NBL3 297 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 THAP3Q8WTV1 239 aaPredicted RBP19.32■□□□□ 0.68
HSPG2-205ENST00000427897 DAZLQ92904 295 aaKnown RBP19.32■□□□□ 0.68
HSPG2-205ENST00000427897 ISL2Q96A47 359 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 TMEM125Q96AQ2 219 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 MTFMTQ96DP5 389 aaKnown RBP19.32■□□□□ 0.68
HSPG2-205ENST00000427897 VMP1Q96GC9 406 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 CSF3RQ99062 836 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 MAPKAP1Q9BPZ7 522 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 MRPL46Q9H2W6 279 aaKnown RBP19.32■□□□□ 0.68
HSPG2-205ENST00000427897 OSGIN2Q9Y236 505 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 RNF11Q9Y3C5 154 aa19.32■□□□□ 0.68
HSPG2-205ENST00000427897 MYOCOSA0A1B0GUC4 107 aa19.31■□□□□ 0.68
HSPG2-205ENST00000427897 H0YIV9 168 aa19.31■□□□□ 0.68
HSPG2-205ENST00000427897 STX16-NPEPL1H3BU86 382 aa19.31■□□□□ 0.68
HSPG2-205ENST00000427897 CYR61O00622 381 aa19.31■□□□□ 0.68
HSPG2-205ENST00000427897 E2F3O00716 465 aa19.31■□□□□ 0.68
HSPG2-205ENST00000427897 STX16O14662 325 aa19.31■□□□□ 0.68
HSPG2-205ENST00000427897 MLYCDO95822 493 aa19.31■□□□□ 0.68
HSPG2-205ENST00000427897 DDAH2O95865 285 aa19.31■□□□□ 0.68
HSPG2-205ENST00000427897 TAC1P20366 129 aa19.31■□□□□ 0.68
HSPG2-205ENST00000427897 MAGEA12P43365 314 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms