RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 VTI1BQ9UEU0 232 aa13.9□□□□□ -0.18
ATG4B-209ENST00000425239 DAPP1Q9UN19 280 aa13.9□□□□□ -0.18
ATG4B-209ENST00000425239 OARD1Q9Y530 152 aa13.9□□□□□ -0.18
ATG4B-209ENST00000425239 FAM215AQ9Y5M1 114 aa13.9□□□□□ -0.18
ATG4B-209ENST00000425239 LIPGQ9Y5X9 500 aa13.9□□□□□ -0.18
ATG4B-209ENST00000425239 NPEPPSL1A6NEC2 478 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 GOLGA6L6A8MZA4 724 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 KLK8O60259 260 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 CTNSO60931 367 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 CLEC3AO75596 197 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 GNAZP19086 355 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 GGT5P36269 586 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 SOX3P41225 446 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 HNMTP50135 292 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 DLX5P56178 289 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 STXBP1P61764 594 aaKnown RBP13.89□□□□□ -0.19
ATG4B-209ENST00000425239 PPIAP62937 165 aaKnown RBP13.89□□□□□ -0.19
ATG4B-209ENST00000425239 CBLBQ13191 982 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 ELAVL1Q15717 326 aaKnown RBP13.89□□□□□ -0.19
ATG4B-209ENST00000425239 HYAL4Q2M3T9 481 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 ZNF750Q32MQ0 723 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 ABHD17CQ6PCB6 329 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 IL20RBQ6UXL0 311 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 UBE3DQ7Z6J8 389 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 LIX1LQ8IVB5 337 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 GPALPP1Q8IXQ4 340 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 ZNF595Q8IYB9 648 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 OR2L5Q8NG80 312 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 GABPB2Q8TAK5 448 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-209ENST00000425239 NRGNQ92686 78 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 SCYL1Q96KG9 808 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 CSF3RQ99062 836 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 TTTY12Q9BZ98 90 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 DDX47Q9H0S4 455 aaKnown RBP13.89□□□□□ -0.19
ATG4B-209ENST00000425239 ADAP2Q9NPF8 381 aa13.89□□□□□ -0.19
ATG4B-209ENST00000425239 PRRC2AP48634 2157 aaKnown RBP13.89□□□□□ -0.19
ATG4B-209ENST00000425239 MYOCOSA0A1B0GUC4 107 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 FAM90A27PA6NNH2 459 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 FOXO6A8MYZ6 492 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 NPIPA2E9PIF3 369 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 NPIPA3F8WFD2 350 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 CES2O00748 559 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 ERI3O43414 337 aaKnown RBP13.88□□□□□ -0.19
ATG4B-209ENST00000425239 EPORP19235 508 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 CD22P20273 847 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 CNR1P21554 472 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 DNAJA1P31689 397 aaKnown RBP13.88□□□□□ -0.19
ATG4B-209ENST00000425239 HK2P52789 917 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 E2F2Q14209 437 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 PPP1R7Q15435 360 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 TSNQ15631 228 aaKnown RBP13.88□□□□□ -0.19
ATG4B-209ENST00000425239 ADGRD1Q6QNK2 874 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 RGS9BPQ6ZS82 235 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 ACAD11Q709F0 780 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 NKAPQ8N5F7 415 aaKnown RBP13.88□□□□□ -0.19
ATG4B-209ENST00000425239 FAM47BQ8NA70 645 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 MORN4Q8NDC4 146 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 WDR34Q96EX3 536 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 TTYH2Q9BSA4 534 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 TMEM79Q9BSE2 394 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 TMUB1Q9BVT8 246 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 CXXC4Q9H2H0 198 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 SH2D2AQ9NP31 389 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 SEMA4BQ9NPR2 832 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-209ENST00000425239 PPANQ9NQ55 473 aaKnown RBP13.88□□□□□ -0.19
ATG4B-209ENST00000425239 KCNN3Q9UGI6 736 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 CHMP2BQ9UQN3 213 aa13.88□□□□□ -0.19
ATG4B-209ENST00000425239 FAM221AA4D161 298 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 OR14I1A6ND48 311 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 USP27XA6NNY8 438 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 FAM166BA8MTA8 275 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 A8MVJ9 347 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 WWP2O00308 870 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 CLDN4O14493 209 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 WDR47O94967 919 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 CELA3AP09093 270 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 GLI4P10075 376 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 ACVR2AP27037 513 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 CERS1P27544 350 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 GSTM2P28161 218 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 PLA2G16P53816 162 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 RNF4P78317 190 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 SLC13A2Q13183 592 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 SLBPQ14493 270 aaKnown RBP eCLIP13.87□□□□□ -0.19
ATG4B-209ENST00000425239 MORF4L2Q15014 288 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 TGFBIQ15582 683 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 TRILQ7L0X0 811 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 CLNKQ7Z7G1 428 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 TMEM132CQ8N3T6 1108 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 TMEM251Q8N6I4 163 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 TTLQ8NG68 377 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 OR5M9Q8NGP3 310 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 OR8K3Q8NH51 312 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 LRRC39Q96DD0 335 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 CFAP36Q96G28 342 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 POM121Q96HA1 1249 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 FAR2Q96K12 515 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 CAPZA3Q96KX2 299 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 SERINC2Q96SA4 455 aa13.87□□□□□ -0.19
ATG4B-209ENST00000425239 ALOXE3Q9BYJ1 711 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms