RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 TSPYL1Q9H0U9 437 aa20.12■□□□□ 0.81
CDCP1-202ENST00000425231 KLHL1Q9NR64 748 aa20.12■□□□□ 0.81
CDCP1-202ENST00000425231 ACSL3O95573 720 aa20.11■□□□□ 0.81
CDCP1-202ENST00000425231 TGFB1P01137 390 aa20.11■□□□□ 0.81
CDCP1-202ENST00000425231 SERPINB8P50452 374 aa20.11■□□□□ 0.81
CDCP1-202ENST00000425231 GPR143P51810 404 aa20.11■□□□□ 0.81
CDCP1-202ENST00000425231 OC90Q02509 493 aaPredicted RBP20.11■□□□□ 0.81
CDCP1-202ENST00000425231 TGM3Q08188 693 aa20.11■□□□□ 0.81
CDCP1-202ENST00000425231 SLC13A2Q13183 592 aa20.11■□□□□ 0.81
CDCP1-202ENST00000425231 PFKFB4Q16877 469 aa20.11■□□□□ 0.81
CDCP1-202ENST00000425231 GLE1Q53GS7 698 aaKnown RBP20.11■□□□□ 0.81
CDCP1-202ENST00000425231 GRHL2Q6ISB3 625 aa20.11■□□□□ 0.81
CDCP1-202ENST00000425231 SRFBP1Q8NEF9 429 aaKnown RBP20.11■□□□□ 0.81
CDCP1-202ENST00000425231 MNS1Q8NEH6 495 aa20.11■□□□□ 0.81
CDCP1-202ENST00000425231 FMO2Q99518 471 aa20.11■□□□□ 0.81
CDCP1-202ENST00000425231 TBCDQ9BTW9 1192 aa20.11■□□□□ 0.81
CDCP1-202ENST00000425231 TRIM45Q9H8W5 580 aaPredicted RBP20.11■□□□□ 0.81
CDCP1-202ENST00000425231 COPS7BQ9H9Q2 264 aaPredicted RBP20.11■□□□□ 0.81
CDCP1-202ENST00000425231 PNO1Q9NRX1 252 aaKnown RBP20.11■□□□□ 0.81
CDCP1-202ENST00000425231 LRFN1Q9P244 771 aa20.11■□□□□ 0.81
CDCP1-202ENST00000425231 ZNF223Q9UK11 482 aaPredicted RBP20.11■□□□□ 0.81
CDCP1-202ENST00000425231 MRPS33Q9Y291 106 aaKnown RBP20.11■□□□□ 0.81
CDCP1-202ENST00000425231 DIDO1Q9BTC0 2240 aaKnown RBP20.11■□□□□ 0.81
CDCP1-202ENST00000425231 LRRC14BA6NHZ5 514 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 RTCAO00442 366 aaKnown RBP20.1■□□□□ 0.81
CDCP1-202ENST00000425231 CTNSO60931 367 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 SP1P08047 785 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 CTAGE8P0CG41 777 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 PCNAP12004 261 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 CD46P15529 392 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 ATP5A1P25705 553 aaKnown RBP20.1■□□□□ 0.81
CDCP1-202ENST00000425231 ALDH18A1P54886 795 aaKnown RBP20.1■□□□□ 0.81
CDCP1-202ENST00000425231 TMEM35AQ53FP2 167 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 GFRALQ6UXV0 394 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 MAMDC2Q7Z304 686 aaPredicted RBP20.1■□□□□ 0.81
CDCP1-202ENST00000425231 ZNF227Q86WZ6 799 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 CTAGE4Q8IX94 777 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 PLD6Q8N2A8 252 aaKnown RBP20.1■□□□□ 0.81
CDCP1-202ENST00000425231 HORMAD2Q8N7B1 307 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 ACOT4Q8N9L9 421 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 ISL2Q96A47 359 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 DEFB126Q9BYW3 111 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 ROGDIQ9GZN7 287 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 LYRM4Q9HD34 91 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 ASPDHA6ND91 283 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 SCELO95171 688 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 UNC5CO95185 931 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 GFAPP14136 432 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 EEF1DP29692 281 aaKnown RBP20.1■□□□□ 0.81
CDCP1-202ENST00000425231 SERPINB1P30740 379 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 TRHRP34981 398 aaPredicted RBP20.1■□□□□ 0.81
CDCP1-202ENST00000425231 MAGEA12P43365 314 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 CLCN2P51788 898 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 PCBP2Q15366 365 aaKnown RBP eCLIP20.1■□□□□ 0.81
CDCP1-202ENST00000425231 SLC25A25Q6KCM7 469 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 KLC3Q6P597 504 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 CHSY3Q70JA7 882 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 GALNTL5Q7Z4T8 443 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 CLNKQ7Z7G1 428 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 RNF175Q8N4F7 328 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 TMEM178AQ8NBL3 297 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 CMTM7Q96FZ5 175 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 MAPKAP1Q9BPZ7 522 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 VPS11Q9H270 941 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 SEC14L3Q9UDX4 400 aa20.1■□□□□ 0.81
CDCP1-202ENST00000425231 TRBV11-1A0A0K0K1C0 115 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 SH3BGRLO75368 114 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 TUBB4AP04350 444 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 HIST1H1TP22492 207 aaPredicted RBP20.09■□□□□ 0.81
CDCP1-202ENST00000425231 CYB561P49447 251 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 RCN2Q14257 317 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 TECRLQ5HYJ1 363 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 DEPDC1Q5TB30 811 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 KHDRBS2Q5VWX1 349 aaKnown RBP20.09■□□□□ 0.81
CDCP1-202ENST00000425231 LIPJQ5W064 366 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 HUS1BQ8NHY5 278 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 RELTQ969Z4 430 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 PAFAH2Q99487 392 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 OR51B5Q9H339 312 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 ADAP2Q9NPF8 381 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 ZNF358Q9NW07 568 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 ADGRE2Q9UHX3 823 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 TSC22D4Q9Y3Q8 395 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 ANGPTL3Q9Y5C1 460 aa20.09■□□□□ 0.81
CDCP1-202ENST00000425231 CROCCQ5TZA2 2017 aa20.08■□□□□ 0.81
CDCP1-202ENST00000425231 A0A1B0GUH1 482 aa20.08■□□□□ 0.8
CDCP1-202ENST00000425231 SAP18O00422 153 aaKnown RBP20.08■□□□□ 0.8
CDCP1-202ENST00000425231 INHBAP08476 426 aa20.08■□□□□ 0.8
CDCP1-202ENST00000425231 PIK3CBP42338 1070 aa20.08■□□□□ 0.8
CDCP1-202ENST00000425231 HLCSP50747 726 aa20.08■□□□□ 0.8
CDCP1-202ENST00000425231 AP5B1Q2VPB7 878 aa20.08■□□□□ 0.8
CDCP1-202ENST00000425231 C1QL3Q5VWW1 255 aa20.08■□□□□ 0.8
CDCP1-202ENST00000425231 FJX1Q86VR8 437 aa20.08■□□□□ 0.8
CDCP1-202ENST00000425231 THAP3Q8WTV1 239 aaPredicted RBP20.08■□□□□ 0.8
CDCP1-202ENST00000425231 NCLNQ969V3 563 aa20.08■□□□□ 0.8
CDCP1-202ENST00000425231 VMP1Q96GC9 406 aa20.08■□□□□ 0.8
CDCP1-202ENST00000425231 FRMD6Q96NE9 622 aa20.08■□□□□ 0.8
CDCP1-202ENST00000425231 VTI1BQ9UEU0 232 aa20.08■□□□□ 0.8
CDCP1-202ENST00000425231 MYOCOSA0A1B0GUC4 107 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 SLC25A12O75746 678 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms