RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 FTHL17Q9BXU8 183 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 FXYD6Q9H0Q3 95 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 RBFOX1Q9NWB1 397 aaKnown RBP6.59□□□□□ -1.35
CNOT4-205ENST00000423368 WRAP73Q9P2S5 460 aaPredicted RBP6.59□□□□□ -1.35
CNOT4-205ENST00000423368 NDRG3Q9UGV2 375 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 POLG2Q9UHN1 485 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 CD84Q9UIB8 345 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 IKZF3Q9UKT9 509 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 CA14Q9ULX7 337 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 USP18Q9UMW8 372 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 PCDHA1Q9Y5I3 950 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 AUP1Q9Y679 476 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 CDK5RAP2Q96SN8 1893 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 PQLC2LA1A4F0 135 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 NCF1BA6NI72 391 aaPredicted RBP6.59□□□□□ -1.35
CNOT4-205ENST00000423368 NCF1CA8MVU1 366 aaPredicted RBP6.59□□□□□ -1.35
CNOT4-205ENST00000423368 PIP5K1BO14986 540 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 MID1O15344 667 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 IGF2P01344 180 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 HCKP08631 526 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 NCF1P14598 390 aaPredicted RBP6.59□□□□□ -1.35
CNOT4-205ENST00000423368 MUC1P15941 1255 aaPredicted RBP6.59□□□□□ -1.35
CNOT4-205ENST00000423368 ZNF14P17017 642 aaPredicted RBP6.59□□□□□ -1.35
CNOT4-205ENST00000423368 RORCP51449 518 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 FAM189BP81408 668 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 SP4Q02446 784 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 PTP4A2Q12974 167 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 DOC2BQ14184 412 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 TSC22D1Q15714 1073 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 OR7E24Q6IFN5 339 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 APOBEC3HQ6NTF7 200 aaKnown RBP6.59□□□□□ -1.35
CNOT4-205ENST00000423368 FUT10Q6P4F1 479 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 CNIH2Q6PI25 160 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 BLOC1S3Q6QNY0 202 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 TMEM179Q6ZVK1 233 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 IKBIPQ70UQ0 350 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 ZFP41Q8N8Y5 198 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 TMEM185AQ8NFB2 350 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 ACOT12Q8WYK0 555 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 SLC25A28Q96A46 364 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 LRR1Q96L50 414 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 ABCG5Q9H222 651 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 FZD3Q9NPG1 666 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 MARK1Q9P0L2 795 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 SEC14L3Q9UDX4 400 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 STAP1Q9ULZ2 295 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 AXIN2Q9Y2T1 843 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 MMACHCQ9Y4U1 282 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 OAS3Q9Y6K5 1087 aaKnown RBP6.59□□□□□ -1.35
CNOT4-205ENST00000423368 CSNK1G3Q9Y6M4 447 aa6.59□□□□□ -1.35
CNOT4-205ENST00000423368 C3orf70A6NLC5 250 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-205ENST00000423368 TCP10L2B9ZVM9 353 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 GFRA2O00451 464 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 YIF1AO95070 293 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 CNOT4O95628 575 aaKnown RBP6.58□□□□□ -1.36
CNOT4-205ENST00000423368 LALBAP00709 142 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 POLBP06746 335 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 UGT2B7P16662 529 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 CSF2RBP32927 897 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 PPM1AP35813 382 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 RFC3P40938 356 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 SELENOPP49908 381 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 EIF4HQ15056 248 aaKnown RBP6.58□□□□□ -1.36
CNOT4-205ENST00000423368 PPA1Q15181 289 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 OR8G1Q15617 311 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 RNF151Q2KHN1 245 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 ATP6AP1LQ52LC2 224 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 ARSIQ5FYB1 569 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 FAM102BQ5T8I3 360 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 FCRLBQ6BAA4 426 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 RGS7BPQ6MZT1 257 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-205ENST00000423368 ANGPTL8Q6UXH0 198 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 IL20RBQ6UXL0 311 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 ZPBP2Q6X784 338 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 PDZD3Q86UT5 571 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 CCDC71Q8IV32 467 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-205ENST00000423368 SLC13A3Q8WWT9 602 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 KIAA1191Q96A73 305 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 MARS2Q96GW9 593 aaKnown RBP6.58□□□□□ -1.36
CNOT4-205ENST00000423368 HOPXQ9BPY8 73 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-205ENST00000423368 UGT2B28Q9BY64 529 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 LYARQ9NX58 379 aaKnown RBP6.58□□□□□ -1.36
CNOT4-205ENST00000423368 TMEFF2Q9UIK5 374 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-205ENST00000423368 ASF1AQ9Y294 204 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 TLR6Q9Y2C9 796 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 NUMA1Q14980 2115 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 SYNDIG1LA6NDD5 238 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 ABCD4O14678 606 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 HNRNPDLO14979 420 aaKnown RBP6.58□□□□□ -1.36
CNOT4-205ENST00000423368 SELENOFO60613 162 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 FKTNO75072 461 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 RAB3DO95716 219 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 TSPAN12O95859 305 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 ITGBL1O95965 494 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-205ENST00000423368 AGR2O95994 175 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 F2P00734 622 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 MYL3P08590 195 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 FGF4P08620 206 aa6.58□□□□□ -1.36
CNOT4-205ENST00000423368 HIST1H2AGP0C0S8 130 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-205ENST00000423368 HIST1H2ADP20671 130 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms