RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 ELP3Q9H9T3 547 aa12.66□□□□□ -0.38
CALD1-205ENST00000422748 CRTAC1Q9NQ79 661 aa12.66□□□□□ -0.38
CALD1-205ENST00000422748 COPS3Q9UNS2 423 aa12.66□□□□□ -0.38
CALD1-205ENST00000422748 MRPS7Q9Y2R9 242 aaKnown RBP12.66□□□□□ -0.38
CALD1-205ENST00000422748 MCM3APO60318 1980 aa12.66□□□□□ -0.38
CALD1-205ENST00000422748 LZTS3O60299 673 aaPredicted RBP12.65□□□□□ -0.38
CALD1-205ENST00000422748 ULK1O75385 1050 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 SMPD1P17405 629 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 ITGALP20701 1170 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 EDNRBP24530 442 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 SPIBQ01892 262 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 HSF2Q03933 536 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 PUDPQ08623 228 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 RAB41Q5JT25 222 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 MANEALQ5VSG8 457 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 WSCD1Q658N2 575 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 TMIGD1Q6UXZ0 262 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 LIMS2Q7Z4I7 341 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 RASGRP3Q8IV61 690 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 BBS7Q8IWZ6 715 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 ARRDC2Q8TBH0 407 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 HTATIP2Q9BUP3 242 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 ZNF416Q9BWM5 594 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 NDUFAF4Q9P032 175 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 YARS2Q9Y2Z4 477 aaKnown RBP12.65□□□□□ -0.38
CALD1-205ENST00000422748 LRRTM2O43300 516 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 SUV39H1O43463 412 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 PTP4A3O75365 173 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 RECQL4O94761 1208 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 NUDT7P0C024 238 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 PIPP12273 146 aaPredicted RBP12.65□□□□□ -0.38
CALD1-205ENST00000422748 ANXA3P12429 323 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 CXCL3P19876 107 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 TACR1P25103 407 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 STOMP27105 288 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 CNR2P34972 360 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 SMSP52788 366 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 CLDN8P56748 225 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 GPR85P60893 370 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 PPP3R1P63098 170 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 SOX4Q06945 474 aaPredicted RBP12.65□□□□□ -0.38
CALD1-205ENST00000422748 SP140Q13342 867 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 DCAF4L1Q3SXM0 396 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 DGKKQ5KSL6 1271 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 BICRALQ6AI39 1079 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 BHLHB9Q6PI77 547 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 ZNF730Q6ZMV8 503 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 OTOP2Q7RTS6 562 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 KIAA0907Q7Z7F0 614 aaPredicted RBP12.65□□□□□ -0.38
CALD1-205ENST00000422748 RBFAQ8N0V3 343 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 RTL3Q8N8U3 475 aaKnown RBP12.65□□□□□ -0.38
CALD1-205ENST00000422748 OR4C15Q8NGM1 316 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 OR52P1PQ8NH57 321 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 RAET1EQ8TD07 263 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 SLC35C2Q9NQQ7 365 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 SDHAF2Q9NX18 166 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 ASIC5Q9NY37 505 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 CPA4Q9UI42 421 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 GINS2Q9Y248 185 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 MAB21L2Q9Y586 359 aa12.65□□□□□ -0.38
CALD1-205ENST00000422748 TMEM229AB2RXF0 380 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 ADAMDEC1O15204 470 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 GUCA1CO95843 209 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 MOCS2O96007 188 aaPredicted RBP12.65□□□□□ -0.39
CALD1-205ENST00000422748 HRGP04196 525 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 HAPLN1P10915 354 aaPredicted RBP12.65□□□□□ -0.39
CALD1-205ENST00000422748 HOXB1P14653 301 aaPredicted RBP12.65□□□□□ -0.39
CALD1-205ENST00000422748 IGFBP6P24592 240 aaPredicted RBP12.65□□□□□ -0.39
CALD1-205ENST00000422748 GDF5P43026 501 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 ERVFC1P60507 584 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 BTG1P62324 171 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 TAF12Q16514 161 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 MICAQ29983 383 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 GPR65Q8IYL9 337 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 CHST13Q8NET6 341 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 AP3S1Q92572 193 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 HMCESQ96FZ2 354 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 MND1Q9BWT6 205 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 RBCK1Q9BYM8 510 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 NSUN3Q9H649 340 aaKnown RBP12.65□□□□□ -0.39
CALD1-205ENST00000422748 PDGFCQ9NRA1 345 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 LYARQ9NX58 379 aaKnown RBP12.65□□□□□ -0.39
CALD1-205ENST00000422748 PFDN2Q9UHV9 154 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 PADI2Q9Y2J8 665 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 PRELID3BQ9Y3B1 194 aa12.65□□□□□ -0.39
CALD1-205ENST00000422748 SLC22A23A1A5C7 686 aa12.64□□□□□ -0.39
CALD1-205ENST00000422748 SGK494L7N484 410 aa12.64□□□□□ -0.39
CALD1-205ENST00000422748 CXCL11O14625 94 aa12.64□□□□□ -0.39
CALD1-205ENST00000422748 CNMDO75829 334 aa12.64□□□□□ -0.39
CALD1-205ENST00000422748 SYPP08247 313 aa12.64□□□□□ -0.39
CALD1-205ENST00000422748 PKMP14618 531 aaKnown RBP12.64□□□□□ -0.39
CALD1-205ENST00000422748 CD9P21926 228 aa12.64□□□□□ -0.39
CALD1-205ENST00000422748 F8A1P23610 371 aa12.64□□□□□ -0.39
CALD1-205ENST00000422748 MLLT11Q13015 90 aaPredicted RBP12.64□□□□□ -0.39
CALD1-205ENST00000422748 CTSL3PQ5NE16 218 aa12.64□□□□□ -0.39
CALD1-205ENST00000422748 C6orf132Q5T0Z8 1188 aa12.64□□□□□ -0.39
CALD1-205ENST00000422748 ZNF621Q6ZSS3 439 aa12.64□□□□□ -0.39
CALD1-205ENST00000422748 DGLUCYQ7Z3D6 616 aa12.64□□□□□ -0.39
CALD1-205ENST00000422748 TRIM46Q7Z4K8 759 aa12.64□□□□□ -0.39
CALD1-205ENST00000422748 LUZP2Q86TE4 346 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms