RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SSR4P51571 173 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 PLA2G16P53816 162 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 MTTPP55157 894 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 LIM2P55344 173 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 TGM3Q08188 693 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 CALCOCO2Q13137 446 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 LAPTM5Q13571 262 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 EFTUD2Q15029 972 aaKnown RBP eCLIP16.17■□□□□ 0.182e-7■■■□□ 17.5
MSH6-203ENST00000420813 PDK4Q16654 411 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 PAGE2BQ5JRK9 111 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 ABHD17CQ6PCB6 329 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 FGD2Q7Z6J4 655 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 GPALPP1Q8IXQ4 340 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 TMEM132CQ8N3T6 1108 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 FAM47BQ8NA70 645 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 TRIM8Q9BZR9 551 aa16.17■□□□□ 0.18
MSH6-203ENST00000420813 COPS7BQ9H9Q2 264 aaPredicted RBP16.17■□□□□ 0.18
MSH6-203ENST00000420813 ZNF490Q9ULM2 529 aaPredicted RBP16.17■□□□□ 0.18
MSH6-203ENST00000420813 TACC2O95359 2948 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 TCRBV9S1A1TA0A576 114 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 FAM187AA6NFU0 413 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 CXorf49A8MYA2 514 aaPredicted RBP16.16■□□□□ 0.18
MSH6-203ENST00000420813 ADAM10O14672 748 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 PHGDHO43175 533 aaKnown RBP16.16■□□□□ 0.18
MSH6-203ENST00000420813 PRAMEF4O60810 478 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 CTNSO60931 367 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 SNRPB2P08579 225 aaKnown RBP16.16■□□□□ 0.18
MSH6-203ENST00000420813 GSTA2P09210 222 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 CERS1P27544 350 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 PPP2R1BP30154 601 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 PTGS2P35354 604 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 KCNC1P48547 511 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 DOC2AQ14183 400 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 E2F2Q14209 437 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 CDSNQ15517 529 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 OR4D1Q15615 310 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 ZKSCAN8Q15776 578 aaPredicted RBP16.16■□□□□ 0.18
MSH6-203ENST00000420813 TBCCQ15814 346 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 XKR6Q5GH73 641 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 PRAMEF9Q5VWM5 478 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 SPATA6LQ8N4H0 392 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 SNX31Q8N9S9 440 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 SRFBP1Q8NEF9 429 aaKnown RBP16.16■□□□□ 0.18
MSH6-203ENST00000420813 DAZLQ92904 295 aaKnown RBP16.16■□□□□ 0.18
MSH6-203ENST00000420813 KIAA1191Q96A73 305 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 UBXN10Q96LJ8 280 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 KCNC2Q96PR1 638 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 CSF3RQ99062 836 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 ERP44Q9BS26 406 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 ROGDIQ9GZN7 287 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 LYRM4Q9HD34 91 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 SAYSD1Q9NPB0 183 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 TIMMDC1Q9NPL8 285 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 PRDM7Q9NQW5 492 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 PTBP2Q9UKA9 531 aaKnown RBP16.16■□□□□ 0.18
MSH6-203ENST00000420813 HCFC1P51610 2035 aa16.16■□□□□ 0.18
MSH6-203ENST00000420813 FAM159BA6NKW6 160 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 TUBB4AP04350 444 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 CD22P20273 847 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 CASP2P42575 452 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 RAB10P61026 200 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 HIST2H2ACQ16777 129 aaPredicted RBP16.15■□□□□ 0.18
MSH6-203ENST00000420813 CMPK2Q5EBM0 449 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 HIST2H2AA3Q6FI13 130 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 ADNP2Q6IQ32 1131 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 LRRC70Q7Z2Q7 622 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 MAATS1Q7Z4T9 603 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 MDGA2Q7Z553 956 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 INTS1Q8N201 2190 aaKnown RBP16.15■□□□□ 0.18
MSH6-203ENST00000420813 MORN4Q8NDC4 146 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 C7orf57Q8NEG2 295 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 OR14A16Q8NHC5 309 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 FAM57AQ8TBR7 257 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 ESAMQ96AP7 390 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 TEP1Q99973 2627 aaKnown RBP16.15■□□□□ 0.18
MSH6-203ENST00000420813 PHACTR1Q9C0D0 580 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 PLSCR2Q9NRY7 297 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 CD274Q9NZQ7 290 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 MYOTQ9UBF9 498 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 VTI1BQ9UEU0 232 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 CLCA3PQ9Y6N3 262 aa16.15■□□□□ 0.18
MSH6-203ENST00000420813 A0A1B0GTH9 108 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 TMEM200CA6NKL6 621 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 A8MVJ9 347 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 C19orf84I3L1E1 186 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 ZNHIT1O43257 154 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 HS6ST1O60243 411 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 PRKNO60260 465 aaPredicted RBP16.14■□□□□ 0.17
MSH6-203ENST00000420813 C1QAP02745 245 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 S100BP04271 92 aaPredicted RBP16.14■□□□□ 0.17
MSH6-203ENST00000420813 IFNA16P05015 189 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 EPORP19235 508 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 SSTR2P30874 369 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 RFC3P40938 356 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 IRF8Q02556 426 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 BMPR2Q13873 1038 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 SERTAD2Q14140 314 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 FBXO48Q5FWF7 155 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 HSDL2Q6YN16 418 aa16.14■□□□□ 0.17
MSH6-203ENST00000420813 C3orf62Q6ZUJ4 267 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms