RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 ING2Q9H160 280 aa11.75□□□□□ -0.53
SKA1-203ENST00000417656 MLXIPLQ9NP71 852 aa11.75□□□□□ -0.53
SKA1-203ENST00000417656 DAPP1Q9UN19 280 aa11.75□□□□□ -0.53
SKA1-203ENST00000417656 LOC102723996A0A087X1L8 192 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 A0A0A6YYD5 115 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 IGHV3-20A0A0C4DH32 117 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 TMEM120BA0PK00 339 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 WDR91A4D1P6 747 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 H3BQF6 201 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 TMPRSS11DO60235 418 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 NPHS1O60500 1241 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 GBAP04062 536 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 CYC1P08574 325 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 DHRS4L1P0CG22 281 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 CHN1P15882 459 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 MAOAP21397 527 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 TSFMP43897 325 aaKnown RBP11.74□□□□□ -0.53
SKA1-203ENST00000417656 RRADP55042 308 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 HNRNPH2P55795 449 aaKnown RBP11.74□□□□□ -0.53
SKA1-203ENST00000417656 BTG2P78543 158 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 CSTF3Q12996 717 aaKnown RBP11.74□□□□□ -0.53
SKA1-203ENST00000417656 KCNAB2Q13303 367 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 LY6DQ14210 128 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 RCN2Q14257 317 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 ABRAXAS2Q15018 415 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 AGBL2Q5U5Z8 902 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 CLEC6AQ6EIG7 209 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 TMEM205Q6UW68 189 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 SCIMPQ6UWF3 145 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 QSOX2Q6ZRP7 698 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 MED25Q71SY5 747 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 ANKRD37Q7Z713 158 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 CUZD1Q86UP6 607 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 ZCCHC7Q8N3Z6 543 aaKnown RBP11.74□□□□□ -0.53
SKA1-203ENST00000417656 TMEM102Q8N9M5 508 aaPredicted RBP11.74□□□□□ -0.53
SKA1-203ENST00000417656 SREK1Q8WXA9 508 aaKnown RBP11.74□□□□□ -0.53
SKA1-203ENST00000417656 METTL21AQ8WXB1 218 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 NACC2Q96BF6 587 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 ARL8AQ96BM9 186 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 CNDP1Q96KN2 507 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 FER1L6-AS2Q96M78 137 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 BBC3Q96PG8 261 aaPredicted RBP11.74□□□□□ -0.53
SKA1-203ENST00000417656 TRMOQ9BU70 441 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 ACPTQ9BZG2 426 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 BRF2Q9HAW0 419 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 ZNF160Q9HCG1 818 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 LYRM4Q9HD34 91 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 PSD3Q9NYI0 1048 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 FBXW2Q9UKT8 454 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 FIS1Q9Y3D6 152 aa11.74□□□□□ -0.53
SKA1-203ENST00000417656 ATMQ13315 3056 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 UQCRHLA0A096LP55 91 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 IGHV1-45A0A0A0MS14 117 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 A0A1W2PQ72 361 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 TMEM233B4DJY2 109 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 CYR61O00622 381 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 ATXN7O15265 892 aaPredicted RBP11.73□□□□□ -0.53
SKA1-203ENST00000417656 ULK1O75385 1050 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 PRKRAO75569 313 aaKnown RBP11.73□□□□□ -0.53
SKA1-203ENST00000417656 SEC24DO94855 1032 aaPredicted RBP11.73□□□□□ -0.53
SKA1-203ENST00000417656 HPP00738 406 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 UQCRHP07919 91 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 HSD3B1P14060 373 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 CPN2P22792 545 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 HSD3B2P26439 372 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 SERPINB3P29508 390 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 ARRB2P32121 409 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 CCL11P51671 97 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 ARFIP1P53367 373 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 HMGCS1Q01581 520 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 TNFRSF17Q02223 184 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 GALNT1Q10472 559 aaPredicted RBP11.73□□□□□ -0.53
SKA1-203ENST00000417656 SLAMF1Q13291 335 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 RAPSNQ13702 412 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 PCOLCEQ15113 449 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 CHI3L2Q15782 390 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 TTMPQ5BVD1 217 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 ARL13AQ5H913 290 aaPredicted RBP11.73□□□□□ -0.53
SKA1-203ENST00000417656 CES4AQ5XG92 561 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 IGSF10Q6WRI0 2623 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 COMMD6Q7Z4G1 85 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 CLNKQ7Z7G1 428 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 NUDCD3Q8IVD9 361 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 SCUBE1Q8IWY4 988 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 METTL4Q8N3J2 472 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 AMER2Q8N7J2 671 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 EXD3Q8N9H8 876 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 CLEC1AQ8NC01 280 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 PPP1R14CQ8TAE6 165 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 MGARPQ8TDB4 240 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 VPS50Q96JG6 964 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 PTCHD1Q96NR3 888 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 MFRPQ9BY79 579 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 DDX31Q9H8H2 851 aaKnown RBP11.73□□□□□ -0.53
SKA1-203ENST00000417656 VIPAS39Q9H9C1 493 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 NECTIN3Q9NQS3 549 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 PRDM9Q9NQV7 894 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 PRTFDC1Q9NRG1 225 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 KCMF1Q9P0J7 381 aa11.73□□□□□ -0.53
SKA1-203ENST00000417656 C19orf25Q9UFG5 118 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms