RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TESK1Q15569 626 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 TGFBIQ15582 683 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 ELAVL1Q15717 326 aaKnown RBP13.77□□□□□ -0.21
RPS28-201ENST00000417088 EMC4Q5J8M3 183 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 TMEM211Q6ICI0 200 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 ADNP2Q6IQ32 1131 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 ARHGAP11AQ6P4F7 1023 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 ABHD17CQ6PCB6 329 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 CLNKQ7Z7G1 428 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 GPALPP1Q8IXQ4 340 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 TMEM132CQ8N3T6 1108 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 RPRMLQ8N4K4 120 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 OR2L5Q8NG80 312 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 ASB5Q8WWX0 329 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 SERINC2Q96SA4 455 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 CSF3RQ99062 836 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 CAPS2Q9BXY5 557 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 PITHD1Q9GZP4 211 aaPredicted RBP13.77□□□□□ -0.21
RPS28-201ENST00000417088 REXO4Q9GZR2 422 aaKnown RBP13.77□□□□□ -0.21
RPS28-201ENST00000417088 TP63Q9H3D4 680 aaPredicted RBP13.77□□□□□ -0.21
RPS28-201ENST00000417088 RHOJQ9H4E5 214 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 EHD1Q9H4M9 534 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 HPF1Q9NWY4 346 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 TRMT1Q9NXH9 659 aaKnown RBP13.77□□□□□ -0.21
RPS28-201ENST00000417088 GPRC5BQ9NZH0 403 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 MYOTQ9UBF9 498 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 ZNF490Q9ULM2 529 aaPredicted RBP13.77□□□□□ -0.21
RPS28-201ENST00000417088 DAPP1Q9UN19 280 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 ERVK-11Q9UQG0 969 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 RNF6Q9Y252 685 aa13.77□□□□□ -0.21
RPS28-201ENST00000417088 MRPS33Q9Y291 106 aaKnown RBP13.77□□□□□ -0.21
RPS28-201ENST00000417088 SETD2Q9BYW2 2564 aaPredicted RBP13.77□□□□□ -0.21
RPS28-201ENST00000417088 DNAJC13O75165 2243 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 MYOCOSA0A1B0GUC4 107 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 USP27XA6NNY8 438 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 E7ESA3 106 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 CTNSO60931 367 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 PIAS1O75925 651 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 WISP3O95389 354 aaPredicted RBP13.76□□□□□ -0.21
RPS28-201ENST00000417088 IFNA16P05015 189 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 IGFBP2P18065 325 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 CERS1P27544 350 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 GGT5P36269 586 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 MTTPP55157 894 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 PPIAP62937 165 aaKnown RBP13.76□□□□□ -0.21
RPS28-201ENST00000417088 BMPR2Q13873 1038 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 FBXO48Q5FWF7 155 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 TRIM40Q6P9F5 258 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 IL20RBQ6UXL0 311 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 HSDL2Q6YN16 418 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 CDH24Q86UP0 819 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 CREG2Q8IUH2 290 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 SPATA6LQ8N4H0 392 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 OR2M7Q8NG81 312 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 LILRB4Q8NHJ6 448 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 PTPMT1Q8WUK0 201 aaPredicted RBP13.76□□□□□ -0.21
RPS28-201ENST00000417088 SREK1Q8WXA9 508 aaKnown RBP13.76□□□□□ -0.21
RPS28-201ENST00000417088 RND1Q92730 232 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 ESAMQ96AP7 390 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 RUNDC3BQ96NL0 473 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 F2RL3Q96RI0 385 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 RASL10BQ96S79 203 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 ALOXE3Q9BYJ1 711 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 UCK2Q9BZX2 261 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 TRIM31Q9BZY9 425 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 DERL2Q9GZP9 239 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 NPDC1Q9NQX5 325 aaPredicted RBP13.76□□□□□ -0.21
RPS28-201ENST00000417088 SMYD2Q9NRG4 433 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 DNAJC11Q9NVH1 559 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 MTO1Q9Y2Z2 717 aaKnown RBP13.76□□□□□ -0.21
RPS28-201ENST00000417088 CLCA3PQ9Y6N3 262 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 MTORP42345 2549 aa13.76□□□□□ -0.21
RPS28-201ENST00000417088 INTS1Q8N201 2190 aaKnown RBP13.76□□□□□ -0.21
RPS28-201ENST00000417088 A0A0G2JMM0 328 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 A0A1W2PPB8 328 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 A0A1W2PRS3 328 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 NKX2-6A6NCS4 301 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 SYNDIG1LA6NDD5 238 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 FAM166BA8MTA8 275 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 KIR3DP1A8MWS1 328 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 WWP2O00308 870 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 CLGNO14967 610 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 FANCGO15287 622 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 TOXO94900 526 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 CD22P20273 847 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 CHRNB4P30926 498 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 HPDP32754 393 aaPredicted RBP13.75□□□□□ -0.21
RPS28-201ENST00000417088 SOX3P41225 446 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 HSPA7P48741 367 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 HK2P52789 917 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 SLC12A2P55011 1212 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 POU4F1Q01851 419 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 PLGLB1Q02325 96 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 TFF3Q07654 80 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 CBLBQ13191 982 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 DOC2AQ14183 400 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 UBE3DQ7Z6J8 389 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 GPSM1Q86YR5 675 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 TCAIMQ8N3R3 496 aa13.75□□□□□ -0.21
RPS28-201ENST00000417088 ZNF321PQ8N8H1 164 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms